Pseudomonas batumici: NUH87_07850
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Entry
NUH87_07850 CDS
T10437
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
pbam Pseudomonas batumici
Pathway
pbam02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NUH87_07850 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbam02044
]
NUH87_07850 (tssB)
Secretion system [BR:
pbam02044
]
Type VI secretion system
Imp/Vas secretion system core components
NUH87_07850 (tssB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T6SS_VipA
Motif
Other DBs
NCBI-ProteinID:
WVV64010
LinkDB
All DBs
Position
1779482..1780033
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AA seq
183 aa
AA seq
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MAESTQHKLDRIRPPRVQITYDVETGGAIEKKELPLVVGILADLSGKPKNPPAKLSDRRF
VEIDRDNFNEVLASIAPRSVLQVKNTFATDDSKLNIELKFNHIDDFDPVKVVGQVVPLRR
LFEARQRLRDLLTKLDGNDDLDRLLRDVIANTEGLQEIKSSARVQEAPVADKDADAPAEE
PQA
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaagtacccagcacaagctcgaccggattcgtccgccgcgcgtccagatcacc
tatgacgtggagacgggcggcgccatcgagaaaaaggaactgcccctggtggtcggcatc
ctcgccgatttgtccggcaagccaaaaaatcccccggcgaaactgagcgaccgccgcttc
gtcgagatcgaccgcgacaacttcaacgaagtcctcgcttccatcgctccgcgctcggtg
ctgcaggtcaagaacaccttcgccacggacgacagcaagctcaatatcgaactcaagttc
aaccatatcgacgacttcgacccggtcaaagtggtggggcaggtcgtcccgctgcgccgc
ctgttcgaggctcgccagcgcctgcgcgacctgctgaccaaactcgacggcaacgatgat
ctggacaggctgctgcgtgacgtgatcgccaacaccgaaggcttgcaggagatcaagtcg
tccgcccgcgtgcaggaagcccctgtcgccgacaaggacgccgacgcccctgccgaagaa
ccacaagcctga
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