Pseudomonas batumici: NUH87_08055
Help
Entry
NUH87_08055 CDS
T10437
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pbam Pseudomonas batumici
Pathway
pbam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NUH87_08055 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbam03400
]
NUH87_08055 (uvrB)
DNA repair and recombination proteins [BR:
pbam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NUH87_08055 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NUH87_08055 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WVV64045
LinkDB
All DBs
Position
1822264..1824279
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPEAIRQMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNDMDFARATFRVRGDVIDVYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLDAIDGIKEELKERLDYLRDNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRASGEAPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEAVSPQTIFVSATPGNYEAEHAGRVVEQVVRPTGLVDPQ
VEVRPALTQVDDLLSEINKRVALEERVLVTTLTKRMAEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETERRRDKQIAFNLANGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEESARYENELRSPSEIAKRIRQLEEKMYQLARDLEFEAAAQMRDE
VAKLRERLLTV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaattccagctcgtcacccgcttccagcccgccggcgaccagcccgaagccatt
cgtcagatggtcgagggcatcgaagccggcctggctcaccagaccctgctcggggtgacc
ggctcgggcaagaccttcagcatcgccaacgtcatcgcccaggtgcaacggcccaccttg
gtgctggcgccgaacaagaccctggccgcgcagttgtacggcgagttcaaggcgtttttc
ccgaacaacgccgtggagtatttcgtttcctactacgactactaccagccggaagcctac
gtgccctcctccgatacctttatcgagaaggatgcgtcgatcaacgaccatatcgaacag
atgcgcctgtcggcgaccaaggcgctgctggagcgcaaggacgccatcatcgtcaccacg
gtgtcctgcatctatggcctgggcagcccggaaacctacctgaagatggtcctgcacgtg
gaccgtggcgacaagctcgaccagcgcgccctgctgcgccgcctggccgacctgcaatac
acccgcaacgacatggacttcgcccgggcgaccttccgggtgcgcggcgacgtgatcgac
gtctacccggccgaatccgacctggaagcgatccggatcgagctgttcgacgacgaagtg
gaaagcctctcggccttcgacccgctgaccggcgaggtgatccgcaagctgccgcgcttt
accttctatccgaaaagccactacgtgacgccgcgggaaaccctgctcgatgccatcgac
gggatcaaggaggagctcaaggagcgcctggactacctgcgcgacaacaacaagctggtg
gaagcccagcgcctggagcagcgcacccgcttcgacctggaaatgatcctcgagctgggt
tactgcaacggcatcgaaaactactcgcgctacctctcgggccgcgcctccggcgaagca
ccgccgaccctttacgactacctgccggcggatgcgctgctggtgatcgacgaatcccac
gtcagcgttccgcaagtcggcgccatgtacaagggcgaccgctcgcgcaaggaaaccctg
gtggaatacggtttccgcctgccctcggcgctggacaaccggccgatgcgcttcgacgag
tgggaagcggtcagcccgcagaccattttcgtctccgccacccccggcaactacgaagcc
gaacacgccggccgggtcgtcgagcaggtggttcgccccaccggcctggtggacccgcag
gtggaggtccgcccggcgctgacccaggtcgacgacctgctctcggaaatcaacaagcgg
gtggcgctggaagagcgcgtgctggtcaccaccctgaccaagcgcatggccgaggacctc
accgactacctcgccgaccacggcgtgcgggtgcgctacctgcactcggacatcgacacc
gtggaacgggtggaaatcatccgcgacctgcgcctgggcaccttcgatgtgctggtgggg
atcaacctgctgcgcgagggcctggacatgcccgaggtgtcgctggtggccatcctcgat
gcggacaaggaaggcttcctgcgttccgagcgctcgctgatccagaccatcggccgggcg
gcgcgtaacctcaacggccgggcgattctctacgcggaccgcatcaccggctccatggaa
cgggcgatcggcgagaccgagcgccggcgcgacaagcagatcgccttcaacctggccaat
ggcatcacgcccaaaggcgtgttcaaggatgtcgccgacatcatggaaggcgccaccgtg
cccggctcgcgcagcaagaagcgcaagggcatggccaaggccgccgaggaaagcgcccgc
tacgaaaacgaactgcgctcgccgagcgagatcgccaagcgtattcgccagctggaagag
aagatgtaccagttggcccgcgacctggaattcgaggcggcggcgcagatgcgcgacgag
gtcgccaagttgcgtgaacgcctgctgaccgtatag
DBGET
integrated database retrieval system
