KEGG   Pseudomonas batumici: NUH87_10610
Entry
NUH87_10610       CDS       T10437                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pbam  Pseudomonas batumici
Pathway
pbam02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pbam00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NUH87_10610
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pbam02022]
    NUH87_10610
Two-component system [BR:pbam02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   NUH87_10610
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 Mg_chelatase FleQ AAA_2 MCM
Other DBs
NCBI-ProteinID: WVV64509
LinkDB
Position
2365871..2367202
AA seq 443 aa
MNAVIVVDDEASIRTAVEQWLSLSGFQVQTFSRAEECLAQLPRDFPGVILSDVRMPGMGG
LELLARLREHDCDLPVILLTGHGDVPMAVEAMRDGAYDFLEKPFSPQTLLASLARAMEKR
RLVLENRQLHEQADHRSRLERSLLGVSRSLQTLRRQVLELAALPVNVLIRGETGSGKELV
ARCLHDFGPRADKPFVALNCAAIPEALFEAELFGHESGAFTGAQGKRIGKLEYADGGTLF
LDEIESMPLAQQVKLLRVLQEQKLERLGSNQSIAVDLRIVAATKPDLLDEARAGRFREDL
AYRLTVAQLRLPPLRERREDIPLLFEHFAYGAAQRLGRTSTPLGGAQLSRLLSHDWPGNV
RELANVAERSVLGLGEPEPEGIDPGQSLAAQQEAFEAQCLRSALTRHKGDVKAVLEELQL
PRRTFNEKMQRHGLVREMFLKDE
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgaacgccgtgatcgtggtcgatgacgaagccagcatccgcacggccgtcgagcaatgg
ttgagcctgtcgggattccaggtgcaaaccttcagccgcgccgaggagtgcctggcgcaa
ctgccacgggatttccccggggtgatcctcagtgacgtgcgcatgcccggcatgggcggc
ctggaattgctggcgcgcttgcgggaacacgattgcgacttgccggtgatcctgctgacc
ggtcacggcgatgtgcccatggcggtggaggccatgcgcgatggggcctacgacttcctg
gaaaaacccttcagcccgcagaccctgctcgccagcctcgcccgggccatggagaaacgc
cgcctggtgctggaaaaccgccagttgcacgaacaggcggaccatcgctcgcgactcgag
cgcagcctgctgggagtgtcccgtagcctgcagaccctgcgtcggcaggtgctggagctg
gcggcgttgccggtcaatgtgctgatccgcggcgaaaccggcagcggcaaggagttggtc
gcgcgctgcctgcatgatttcgggccgagggccgacaagccgtttgtcgccctcaactgc
gcggcgattcccgaggcgttgttcgaggccgagttgttcggtcatgaaagcggggccttc
accggcgcccagggcaagcgcatcggcaagctggagtacgccgatggcggcacgctgttt
ctcgacgaaatcgaaagcatgccgctggcccagcaggtgaaactgctgcgggtgttgcag
gaacagaagctggagcggctgggttcgaaccagagcatcgcggtggacctgcgcatcgtc
gcggcgaccaagcccgacttgctcgacgaggcgcgggccggacgttttcgcgaggacctg
gcctatcggctgacggtggcgcaattgcgcctgccaccgctgcgcgaacgacgcgaagat
atccccttgctgttcgagcacttcgcctacggcgcggcgcagcgactggggcggacctcg
acgccgttgggcggcgcgcaactgagccgtctgttgagccatgactggccgggcaatgtg
cgggagctggccaacgtcgccgaacgctcggtactcggcctgggtgagccggagcccgaa
ggcatcgatccgggccaatccctggcggcgcagcaggaggcgtttgaagcgcagtgcctg
cgttcggccctgacccggcacaagggcgatgtgaaagcggtactcgaagagctgcaactg
ccgcgccgtaccttcaatgaaaagatgcagcgccatgggctggtgcgcgagatgtttctc
aaggatgagtga

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