Pseudomonas batumici: NUH87_11235
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Entry
NUH87_11235 CDS
T10437
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
pbam Pseudomonas batumici
Pathway
pbam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NUH87_11235 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbam03400
]
NUH87_11235 (mutS)
DNA repair and recombination proteins [BR:
pbam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NUH87_11235 (mutS)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
WVV65432
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Position
2485841..2488408
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AA seq
855 aa
AA seq
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MSDLSSHTPMMQQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAG
QSIPMCGIPYHSLEGYLAKLVKLGESVVICEQIGDPATSKGPVERQVVRIITPGTVSDEA
LLDERRDNLIAAVLGDERLFGLAVLDITSGNFTVLEIKGWENLLAELERINPVELLIPDD
WPQGLPAEKRRGARRRAPWDFERDSAHKSLCQQFSVQDLKGFGCETLTLAIGAAGCLLGY
AKETQRTALPHLRSLRHERLDDTVVLDGASRRNLELDTNLAGGRDNTLQSVVDRCQTAMG
SRLLTRWLNRPLRDLRVLQARQSSITCLLESYRFEKLQPQLKEIGDIERILARIGLRNAR
PRDLARLRDALGALPQLQDAMLELDAPHLKQLAVTTKTYPELAILLERAIIDNPPAIIRD
GGVLKTGYDAELDELLSLSENAGQFLIDLEAREKARTGLANLKVGYNRVHGYFIELPSKQ
AESAPADYIRRQTLKGAERFITPELKEFEDKALSAKSRALAREKMLYEALLETLIGELPP
LQDTAAALAELDVLSNLAERALTLDLNCPRFVDEPCMRISQGRHPVVEQVLTTPFVANDL
ALDDSTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCELSLVDRIFTRIGSSD
DLAGGRSTFMVEMSETANILHNATERSLVLMDEVGRGTSTFDGLSLAWAAAERLARLRAY
TLFATHYFELTVLPESEPLVANVHLNATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVP
NDVISRAREHLSRLETTSLPHEVPVAKPGKPAAPMQSDLFASLPHPVLDELAKLDLDDLT
PRRALEMLYTLKTRI
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atttccgatctgtccagccacaccccgatgatgcaacagtactggcgcctgaagaaccaa
caccccgaccagctgatgttctaccgcatgggagacttctacgagatcttctacgaagac
gcgaagaaggccgccaagctgctggacatcaccctgacagcccgtgggcaatcggccggg
cagtcgattccgatgtgtgggattccttaccattccctcgagggctatctcgccaagctg
gtgaaactcggcgaatcggtggtgatctgcgagcagatcggcgatccggccaccagcaaa
gggccggtcgaacgtcaggtggtgcggatcatcacccccggcaccgtcagtgacgaagcc
ctgctcgatgagcgccgcgacaacctgatcgccgccgtgctcggcgacgagcgcctgttc
ggcctggccgtgctggacatcaccagcggcaacttcacggtcctcgaaatcaagggctgg
gaaaacctgctggcggagctggaacggatcaacccggtggaattgctgatcccggacgac
tggccacagggcctgccagcggaaaaacgccgtggggcacgtcgccgcgccccgtgggat
ttcgaacgcgattccgcacacaaaagtctctgccagcaattttccgtacaggacctcaag
ggcttcggctgcgaaaccctgaccctggccatcggcgccgccggctgcctgctcggctat
gccaaggaaacccagcgcaccgccctgccccacttgcgcagcctgcgccatgaacgcctg
gacgacaccgtggtgctcgacggcgccagccgccgcaacctggagctggacaccaacctc
gccggcggtcgcgacaacaccctgcaatcggtggtcgaccgttgccagaccgccatgggc
agccgcctgctgacccgctggctgaaccgcccgctgcgcgacctgcgtgtcttgcaggca
cgccagagttccatcacttgcctgctggaaagctatcgcttcgaaaaactgcaaccgcag
ctcaaggaaatcggcgacatcgagcggatcctcgcgcggatcggcctgcgcaacgcccgc
cctcgcgacctggcgcgcctgcgtgacgccctcggcgccctgccacagttgcaggatgcg
atgctcgaactggacgccccgcacctcaagcagctggcagtcaccaccaagacctacccg
gagctggcgatcctgctggaacgcgccatcatcgataacccgccggcgatcatccgcgac
ggcggcgtcctgaaaaccggttacgacgccgagctggacgagttgctgtcactgagcgaa
aacgccggacagttcctcatcgacctggaagcccgggaaaaagcccgtacgggcctcgcc
aacctcaaggtcggctacaaccgggtccacggctacttcatcgagctgcccagcaagcag
gctgaatcggcaccggcggactacatccggcgccagaccctcaagggcgccgagcgcttt
atcaccccggagctcaaggagttcgaagacaaggccctgtcggccaagagtcgtgccctg
gcccgggagaagatgctctacgaggccctgctcgaaaccctgatcggcgaactgccgccg
ctgcaggacaccgccgcggccctggccgagctggatgtactgagcaacctggccgaacgc
gcactgaccctggacctgaactgcccacgcttcgtcgacgagccttgcatgcgcatcagc
caggggcgccacccggtggtcgagcaggtgctgaccacgccgttcgtggccaacgacctg
gcgctcgacgacagcacccgcatgctggtgatcaccggtccgaacatgggtggtaaatcc
acctacatgcgtcagaccgccctgatcgtgctgctggcccatattggcagtttcgtgccg
gcggccagttgcgagctgtccctggtggaccggatcttcacccggatcggttccagcgac
gacctggccggcgggcgctcgaccttcatggtggaaatgagcgaaaccgccaatatcctg
cacaacgccaccgagcgcagcctggtgctgatggacgaagtcggccgcggcaccagcacc
ttcgacggcctgtccctggcctgggccgcggcggaacgtctcgcgcgcctgcgcgcctac
accctgttcgccacccactacttcgaactgaccgtactgccggaaagcgaaccgctggtg
gccaacgtgcacctcaacgccaccgagcacaatgagcggatcgtcttcctgcaccacgta
ctgcccggcccggccagccagagctacggcctggcggtggcgcagctggcaggcgtgcca
aacgatgtgatcagccgcgcccgtgaacacctgagccgcctggaaaccaccagcctgccc
cacgaggtcccggtcgccaaaccggggaaaccggccgcgccgatgcaaagcgatctgttc
gccagcctgccgcatccggtcctggacgaactggccaagctcgatctcgacgacctgaca
ccgcgtcgcgcgctggaaatgctctatacattaaagacacggatctaa
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