Pseudomonas batumici: NUH87_12125
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Entry
NUH87_12125 CDS
T10437
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pbam Pseudomonas batumici
Pathway
pbam00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NUH87_12125
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pbam01007
]
NUH87_12125
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbam03016
]
NUH87_12125
Enzymes [BR:
pbam01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
NUH87_12125
Amino acid related enzymes [BR:
pbam01007
]
Aminoacyl-tRNA synthetase
Class I (U)
NUH87_12125
Transfer RNA biogenesis [BR:
pbam03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
NUH87_12125
Prokaryotic type
NUH87_12125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
WVV64787
LinkDB
All DBs
Position
2681225..2684071
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AA seq
948 aa
AA seq
DB search
MDKTYQPHAIETSWYQTWESENYFAPQGAGDSYTIMIPPPNVTGSLHMGHGFNNAIMDAL
IRFRRMQGRNTLWQPGTDHAGIATQMLVERQLEAQGQSRHDLGREKFLEKVWEWKDQSGG
NISRQIRRLGSSVDWSRERFTMDDGLSEAVKEAFVRLHEDGLIYRGKRLVNWDTKLHTAI
SDLEVENHDEKGFLWNLRYPLADGAKTAEGLDHLIVATTRPETMLGDAAVAVNPNDERYK
ALIGKFVELPLVGRRIPIIADDYCDPEFGTGCVKITPAHDFNDYEVGKRHNLPLLNIFDK
NAEVLAAAQVFNLDGSVNEAIDGTLPAEYVGLNRFQARKEIVAAFEAAGLLVSVDDHALK
VPKGDRSGTIIEPWLTDQWYVSTKPLAEPAIAAVEDGRIAFVPKQYENMYFSWMRDIQDW
CISRQLWWGHRIPAWYDESGKVYVGRDEAEVRAKHNLGPDVALQQDNDVLDTWFSSGLWT
FSTLGWPEQTDFLKTFHPTDVLVTGFDIIFFWVARMIMLTMHLVKNEDGTAQVPFKTVYV
HGLVRDGQGQKMSKSKGNVLDPLDIIDGIELEALVEKRTTGLMQPKLQKAIEKQTRAEFA
EGIASYGTDALRFTFCSLASTGRDIKFDMGRVEGYRNFCNKIWNAARYVLDKGEDCGQNG
EAFELSLADRWIISQLQRTEAEVTRQLDQFRFDLAAQALYEFIWNQYCDWYLELSKPVLW
DENAPVERQRGTRRTLVRVLEVALRLAHPFMPFITEEIWQRLAPLVGAEGKTIMLQPWPV
ANEARIDQAAEDDIEWLKGLMLGVRNIRAEMNIGPGKPLALFLKNVNAQDQRRLSENEQL
LKKLAKLESITVLVAGDEAPLSATALVGEMEVLVPMAGLIDKGAELARLDKEIQRLQGEV
QRVGGKLSNAAFVDKAPAEVIEKERAKLAEAEQALGKLAEQHARIASL
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggataagacctaccagccgcacgccattgaaacttcctggtaccagacctgggagtcc
gagaattatttcgccccgcaaggcgccggcgactcctacaccatcatgatcccgccgccg
aacgtcaccggcagcctgcacatgggccacggtttcaacaacgcgatcatggacgccctg
atccgtttccgccgcatgcagggtcgcaacaccctgtggcagccgggcaccgaccacgcc
gggatcgccacccagatgctggtggagcgccaactcgaagcccagggtcagagccgccac
gacctgggccgcgagaaattcctcgaaaaggtctgggaatggaaggatcagtccggcggc
aatatcagccggcagatccgtcgcctgggctcgtccgtggactggagccgcgagcgcttc
accatggacgacggtctgtcggaagcggtgaaggaagccttcgtgcgcctgcacgaggac
ggcctgatctatcgcggcaagcgcctggtcaactgggacaccaagctgcacacggcgatt
tccgacctcgaagtggaaaaccacgacgagaaaggcttcctgtggaacctgcgctacccg
ctggctgacggtgccaagaccgccgaaggcctggaccacctgatcgtcgccaccacccgt
ccggaaaccatgctcggcgacgccgccgtggccgttaacccgaacgacgagcgctacaaa
gccctgatcggcaaattcgtcgagctgccactggtcggccgccgcatcccgatcatcgcc
gacgactactgcgaccctgaattcggcaccggctgcgtgaagatcaccccggcccacgat
ttcaacgactacgaagtcggcaagcgccacaacctgccgctgctgaacatcttcgacaag
aacgccgaagtgctggcggcggcccaggtattcaacctcgacggcagcgtcaacgaagcg
atcgacggcacactgcccgctgaatacgtcggcctcaaccgtttccaggcccgcaaggaa
atcgttgccgcgttcgaagcggccggcctgctggtcagcgtcgacgatcatgccctgaaa
gtgccgaaaggcgaccgctccggcaccatcatcgagccgtggctgaccgaccagtggtat
gtctccaccaagccgctggccgaaccggccattgccgccgtggaagacggccgcatcgcc
ttcgtgcccaagcagtacgagaacatgtacttctcctggatgcgcgatatccaggactgg
tgcatcagccgccagctgtggtggggccaccggattccggcctggtacgacgagtcgggc
aaggtctatgtcggtcgcgacgaagccgaagtgcgcgccaagcacaacctgggtccggac
gttgcgctgcaacaggacaacgacgtcctcgacacctggttcagttcgggcctgtggacc
ttctccaccctgggctggccggagcagaccgacttcctcaagaccttccaccccaccgac
gtgctggtgaccggtttcgacatcattttcttctgggtcgcccggatgatcatgctgacc
atgcacctggtgaagaacgaggacggcacggcgcaagtaccgttcaagaccgtctacgtc
cacggcctggtgcgtgacggtcagggccagaagatgtccaagtccaagggcaacgtcctc
gacccactggatatcatcgacggcatcgaactcgaagccctggtggagaaacgcaccacc
ggcctgatgcaacccaagttgcaaaaagctatcgagaaacagacccgcgccgagttcgcc
gaagggatcgccagctacggcaccgacgccctgcgcttcaccttctgctcgctggcctcc
accggtcgcgacatcaagttcgacatgggccgcgtcgaaggctaccgcaacttctgcaac
aagatctggaacgccgcgcgctacgtgctggacaagggcgaagactgcggccagaacggc
gaagccttcgagctgtccctggccgatcgctggatcatctcgcagttgcagcgcaccgaa
gccgaagtgacccgccagctcgaccagttccgtttcgacctggccgcccaggccttgtac
gagttcatctggaaccagtattgcgactggtacctggaactgtccaagccggtgctgtgg
gatgagaacgcgccggtcgaacgccagcgcggcacccgccgcaccctggtgcgcgtgctg
gaagtggccctgcgcctggcgcatccgttcatgccgttcatcaccgaggaaatctggcag
cgcctggcgccgctggtcggggcagagggcaagaccatcatgctgcaaccgtggccggtg
gcgaacgaagcgcgtatcgaccaggccgccgaagacgacatcgaatggctcaagggcctg
atgctgggcgtgcgcaacatccgcgcagagatgaacatcggcccgggcaagccactggcg
ttgttcctgaagaacgtcaatgcccaggaccagcggcgcctgagcgagaacgagcaactg
ctgaagaagctcgccaagctcgagtccatcaccgtactggttgctggcgacgaagcgccg
ctgtccgctaccgctttggttggcgagatggaagtgctggtgccgatggccggcctgatc
gacaagggtgccgaactggcgcgcctggacaaggaaatccagcgcctgcagggcgaagtg
cagcgggtcggcggcaagctatcgaatgccgcgttcgtcgacaaggccccggccgaagtc
atcgagaaggaacgcgccaagctggccgaggccgaacaggccctgggcaagctggccgag
cagcatgcgcgaatcgccagtctgtaa
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