Pseudomonas batumici: NUH87_12135
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Entry
NUH87_12135 CDS
T10437
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pbam Pseudomonas batumici
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbam03032
]
NUH87_12135
03036 Chromosome and associated proteins [BR:
pbam03036
]
NUH87_12135
03400 DNA repair and recombination proteins [BR:
pbam03400
]
NUH87_12135
DNA replication proteins [BR:
pbam03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NUH87_12135
Chromosome and associated proteins [BR:
pbam03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NUH87_12135
DNA repair and recombination proteins [BR:
pbam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NUH87_12135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
SSPI
SIS_2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
WVV64789
LinkDB
All DBs
Position
complement(2685329..2685610)
Genome browser
AA seq
93 aa
AA seq
DB search
MAITKDQLIADIAEAIDAPKTTARAALDQLAQIVADQLENGGEITLPGVGKLKVTERPAR
TGRNPSTGAAIEIPAKKVIKLVVAKVLTDAVNK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggctattaccaaagaccaactgatcgccgatatcgccgaagctatcgacgcgccgaaa
accaccgcgcgtgccgctctggaccaactggcccagatcgttgctgatcaattggaaaac
ggcggcgaaatcactctgccaggcgttggcaagctgaaagtgaccgagcgtccagcccgt
accggccgtaacccgtcgactggcgctgccatcgaaatccctgccaagaaagtgatcaag
ctggttgtggccaaggtcctgaccgacgctgtgaacaagtaa
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