Pseudomonas batumici: NUH87_15915
Help
Entry
NUH87_15915 CDS
T10437
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pbam Pseudomonas batumici
Pathway
pbam00521
Streptomycin biosynthesis
pbam00523
Polyketide sugar unit biosynthesis
pbam00525
Acarbose and validamycin biosynthesis
pbam00541
Biosynthesis of various nucleotide sugars
pbam01100
Metabolic pathways
pbam01110
Biosynthesis of secondary metabolites
pbam01250
Biosynthesis of nucleotide sugars
Module
pbam_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NUH87_15915 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NUH87_15915 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
NUH87_15915 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NUH87_15915 (rfbB)
00525 Acarbose and validamycin biosynthesis
NUH87_15915 (rfbB)
Enzymes [BR:
pbam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
NUH87_15915 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
WVV59743
LinkDB
All DBs
Position
3532527..3533609
Genome browser
AA seq
360 aa
AA seq
DB search
MRILVTGGAGFIGSALIRHLILNTEHEVLNLDKLTYAGNLESLTSVATDSRYEFVQADIV
DQATVSAVLARFQPHAIMHLAAESHVDRSIDGPSDFIQTNIVGTYSLLEAARGYWSKLAE
PEKSAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLP
VLLTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGDGLQVRDWLFVEDHARALFKVVT
DGVVGETYNIGGHNEQKNIDVVRGICALLEELAPARPAGVEKFTDLITFVKDRPGHDLRY
AIDAGKIERELGWTPEETFESGLRKTVQWYLENLEWCHRVQDGSYQGERLGALDHKELLA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattctagtcaccggcggtgccggttttattggctccgccctgattcggcacctg
atcctcaataccgagcacgaggtgctaaacctcgataagctcacctatgcaggcaacctg
gagtcgctgaccagcgtcgccaccgacagccgttatgaattcgtccaggccgatatcgtc
gaccaggccaccgtcagtgcggtgctggcccgcttccagccccatgcgatcatgcacctg
gcagcggagtcccatgtggaccgctccatcgacggcccgtcggattttatccagaccaat
atcgtcggcacctacagcctgctggaagccgcccgtggctactggtcgaaactggccgag
cccgagaaaagcgcgttccgcttccaccacatttccaccgacgaagtgtatggcgacctg
cacggtgtcgatgacctgttcaccgaaaccaccccgtacgcccccagctcgccgtattcc
gcgagcaaggcggcgtccgaccacctggtccgcgcctggcaacgcacctatggcctgccg
gtgctgctgaccaactgttcgaacaactacggcccgttccacttcccggaaaagctgatc
ccgctggtgatcctcaacgccttggccggcaagccgctgccggtgtacggcgacggcctg
caggtgcgcgactggctgttcgtcgaggaccacgcccgcgccctgttcaaggtggtgacc
gacggcgtggtcggcgagacctacaacatcggcggccataacgagcagaagaacatcgat
gtcgtccgcggcatctgcgccctgctggaagagctggcaccggcgcgcccggccggcgtg
gaaaaattcaccgacctgatcaccttcgtcaaggatcgcccgggccacgacctgcgctac
gccatcgacgccggcaagatcgagcgcgagctgggctggaccccggaggagaccttcgaa
agcggcctgcgcaagaccgtgcaatggtatctggagaacctggagtggtgtcaccgcgtc
caggacggcagttatcaaggggaacgtctgggcgcattggaccacaaggagctgttggca
tga
DBGET
integrated database retrieval system