Pseudomonas batumici: NUH87_16720
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Entry
NUH87_16720 CDS
T10437
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pbam Pseudomonas batumici
Pathway
pbam03030
DNA replication
pbam03410
Base excision repair
pbam03420
Nucleotide excision repair
pbam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NUH87_16720 (polA)
03410 Base excision repair
NUH87_16720 (polA)
03420 Nucleotide excision repair
NUH87_16720 (polA)
03440 Homologous recombination
NUH87_16720 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbam03032
]
NUH87_16720 (polA)
03400 DNA repair and recombination proteins [BR:
pbam03400
]
NUH87_16720 (polA)
Enzymes [BR:
pbam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NUH87_16720 (polA)
DNA replication proteins [BR:
pbam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NUH87_16720 (polA)
DNA repair and recombination proteins [BR:
pbam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NUH87_16720 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NUH87_16720 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WVV59888
LinkDB
All DBs
Position
complement(3718215..3721040)
Genome browser
AA seq
941 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHAMPPLTTSKGMPTGAVKGVLNMLRSLRKQYPESPFAVVFD
AKGGTFRDEMYADYKANRPSMPDDMRVQIEPLHASVRALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMSETSMDVEGVKAKFGVAPEQIIDLLALM
GDSSDNIPGVKGVGEKTAVALLVGVNGGLKELYEQLDQVPNLPIRGAKTLPAKLLEHKEM
AFLSYRLATIKVDVPLEIGLDDLHLGQPDREKLAELYAHLEFKSWIDELQREAKRIEQAP
VTTPTADSAMLFDTEPAAVEAAPPVAEVASQPQYETILDQARFDVWLKKLKEAKLFAFDT
ETTGIDAQQAQLVGVSFAVQANEAAYVPLAHSYIGAPEQLDRDSVLRALKPLLEDPEKLK
VGQHAKFDMNILANCAIGGDPACGISVRGIAFDTMLESYVLNATATRHDMDSLAKKYLDY
DTVGFQDIAGKGAKQLTFDQIALEQAGPYAAEDADVTLRLHQALHGQLAAVPSLLSVLTD
IEMPLVPVLARIERQGALVDAELLGVQSLELGEKMVALEREAFEIAGEEFNLGSPKQLGA
ILYEKLGMPVLKKTGKGQASTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDRLPEQ
INPRTGRIHTSYHQAVAATGRLSSSDPNLQNIPVRTAEGRRIRQAFIAPAGYKLLAADYS
QIELRIMAHLSKDEGLLNAFRHNLDVHTATAAEVFKVELGEVTSDQRRSAKAINFGLIYG
MGAQKLGKDIGVDTKTAKAYIDLYFARYPGVREYMERTRGQASEQGYVETLFGRRLYLPD
IHSNKPQERAAAERTAINAPMQGTAADIIKKAMVAVDDWLCESGLDARVILQVHDELVLE
VREDLVEEVSEKIRLYMSGAVQLDVPLLVEVGVGNNWDEAH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccctctcgtcctggtggacggttcttcctacctgtatcgcgccttccac
gcgatgccgccgctcaccacgtccaagggcatgcccacgggggcggtcaagggcgtgttg
aacatgctcagaagcctgcgcaagcagtatccggagagcccgttcgcggtggtcttcgac
gccaagggcgggacctttcgcgatgaaatgtacgccgactacaaggccaaccgcccgagc
atgcccgatgacatgcgcgtgcagatcgagccgctgcatgccagcgtgcgcgccctgggt
ttccccttgctgtgcgtggaaggcgtggaagccgacgacgtgatcggcaccctggcccgc
agcagcgcggccgccgaccgcccggtggtgatctccaccggtgacaaggacatggcgcag
ttggtcgacgggcacattaccctggtcaacaccatgtccgaaacctcgatggacgtggag
ggcgtgaaggcgaagtttggcgtcgctcccgagcagatcatcgatctgctggcgttgatg
ggcgactcttccgacaacattcccggggtcaagggcgtcggcgagaaaaccgccgtggcc
ttgctggtgggggtcaacggtggcttgaaagagttgtacgagcagctcgaccaggtgccg
aacctgccgattcgcggggcgaagaccttgccggccaagttgctggaacacaaggaaatg
gcgttcctgtcctatcgcctggcgaccatcaaggtcgatgtgccgctggagatcggcctg
gacgacctgcacctgggccagccggatcgggaaaagctggccgagctgtatgcccacctg
gagttcaagagctggatcgacgagctgcagcgtgaagccaagcgcatcgagcaggcgccg
gtcacgacgcccacggcggacagcgccatgctcttcgacaccgagccggcggccgtggag
gctgccccgccggtggccgaggttgccagccagccgcagtacgaaaccatcctcgatcag
gcccgcttcgatgtctggctgaagaagctcaaggaggcgaaactcttcgccttcgacacc
gaaaccaccgggatcgacgcacaacaggcgcaactggtgggggtttccttcgccgtacag
gccaatgaagccgcctatgtgccgttggcccattcctatatcggtgcaccggagcaactg
gaccgcgacagcgtgctgcgggcgttgaagcccctgctggaagacccggaaaaactcaag
gtcggccagcacgccaagttcgacatgaatatcctcgccaactgcgccatcggcggcgac
ccggcgtgcggcatcagcgtgcgcggcatcgccttcgacaccatgctcgagtcctacgtg
ctcaatgccacggcgacccggcacgacatggacagcctggcgaaaaagtacctcgactac
gacaccgtcggtttccaggacatcgccggcaagggcgccaagcagctgaccttcgaccag
atcgccctggagcaggccggaccttatgccgccgaagacgccgacgtgaccttgcgcctg
caccaggccctgcatgggcaactggcggccgtgccgagcctgctcagtgtgctgaccgat
atcgaaatgccgctggtgccggtcctggcgcggatcgagcgccagggcgcgttggtggat
gccgagttgctcggggtgcagagcctcgaactgggcgagaagatggtggcgctggagcgc
gaagcgttcgagatcgccggcgaggaattcaatctcggctcgcccaagcaactcggggcg
attctctacgagaagctcggcatgccggtgctgaagaagaccggcaagggccaggcgtcc
acggcggaagaggtattggccaagctggccgaggacgattacccgttgcccaaggtgctg
atgcagtaccgctccatgagcaagttgaaaagtacctacaccgatcgcctgccggagcag
atcaacccgcgtaccgggcgtatccatacctcctaccatcaggcggtggcggccaccggg
cgcctgtcctccagcgatccgaacctgcagaacatcccggtgcgtaccgccgaagggcgg
cggattcgccaggcgttcatcgcacctgccggctacaagctgctggcggcggactattcg
cagatcgagctgcggatcatggcccacttgtccaaggacgaaggcttgctcaatgccttc
cgccacaacctcgacgtgcacacggcgacggcggcggaagtgttcaaggtggagctgggc
gaggtcacgtccgaccagcgccgcagcgccaaggccatcaacttcggcctgatctatggc
atgggcgcgcagaagctgggcaaggacatcggcgtcgacaccaagacggccaaggcctat
atcgacctgtatttcgcccgctatccgggggttcgcgaatacatggagcgtacccgtggc
caggcttcggagcagggttatgtcgaaaccctgttcgggcgtcggctgtacctgccggac
atccactccaacaagccccaggagcgtgccgccgccgagcgtacggcgatcaacgcgccg
atgcaggggacggcggcggacatcatcaagaaagccatggtggcggtggatgactggctc
tgcgaatccggcctggatgcccgggtcatcctccaggtacacgacgaactggtgctggag
gtgcgcgaggacctggtggaggaagtcagcgagaagatccgcctgtacatgagcggtgcg
gtgcagctggacgtgccgttgctagtggaagtgggcgtgggcaacaactgggatgaggcg
cattga
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integrated database retrieval system
