Pseudomonas batumici: NUH87_17735
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Entry
NUH87_17735 CDS
T10437
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
pbam Pseudomonas batumici
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
PAAR_motif
TEN_YD-shell
DUF4595
Motif
Other DBs
NCBI-ProteinID:
WVV60080
LinkDB
All DBs
Position
complement(3929551..3933990)
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AA seq
1479 aa
AA seq
DB search
MSDPLWAARLGDALSHTSMMADILGGVLEVAANVAITALATAAVVAATGITVATGGLGAC
VLGAVIGVVVGVAMSKTGADKGLSKMCEGIGNALFPPTVQANILSGSTNTLINSIPAARA
AGAVPSHVEAAGTPDSEPPQEASYLDIAKGFFAQMWRPTVATPAPGAVPKPLDLVTCTKH
PPMPQQFLAEGSKKVSINGQPAVRSGDRSTCDATVVSSGLISPNVTIGGGSVVVREIRSG
KTPGVGLAVTALLMLKGSKGKFFSNLPCMLLAGVNSFVTSQAIGALTNAIAGSPNPVHAA
TGAKVLGGLDDQDFALPGLLRLDWQRFYNSRDERRDSLLGAGWSVPYEVSVRIEAHPEGG
ERLIYTDEQARRIDMGSIPLGGAVFSAGEGLSVRRHGNGQLLIESDDGLYRLFEALSGEL
NHLRLTQLGDRNDNRIYLDYDESGRLARLRDTFDLVQAQLIYSTQWPRRVSRIERLYPDR
SNELLVSYTYDLRGDLAQVLDSTGHVQRRFAYDDGQRLVEHQLSVGLRCFYQWAQVDGRE
WRVVRHWTDEGDEYTFDYDLDAGTTRITDNLKRSSLRRWSPQHQITEYTDNLGQTWQFQW
NDERQLLGATDPQGGQYQFSYDEAGNLCSTQDPLGRSESTLWLEHWALPLVETDAAGNSW
QFRYDSRGNCIQETNPLGHVTRYRVDAQGQTVEIIDTSGKSKTLHWSPLGQLLEHVDCSG
YPTRLNYDERGLLRTVIDALGERTQYDYDPQGRLLGSHLPDGRTHQYQRNADGQLIGYTD
PAGQTVAYRYDRRGQVRQRIDAGGRQVQFSYDAYGRLQALTNENGESYRFAWDAGDRLVE
QQDLDGSGRRYTYNARNDVTRVDTLPAPHGSGLALVPTAPVEPIVHHLERDAAGRLTAKI
TDDGRTEYRYDALDQLTAVTFTDNDGNAQGLGFAYDALGQLLEEQSAAGSLRHHYDELGN
LIQTQLPDDRWLNRLYYGSGHLHQINLDGRVISDFERDRLHREVLRTQGQIGTRSEYDRA
GRLRSRLRRPLSQPSALPASVQQHFDYDPADHLLGRLDQQPGGTHRQLMHHDASGRIVAS
QDSVQGQNETFAYDAAANLLDGPQGGRVLHNKLLTYQDKRYRYDAFGRMIEKRSGSHRVQ
RFAYDAEHRLIEVHNQDGARETVVRMRYDPLGRRIAKTEHDSHGYPLGETHFTWDGLRLL
QEHRHSLSSLYLYADDGHEPLARVDGSGALQKVRYYHNDLSGLPEQLTESDGHVVWQARY
RIWGNTVSETREPYYLEEQNLRFQGQYLDRETGLHYNTFRFYDPDIGRFTTPDPIGLAGG
INLYAYAPSPLTWVDPLGLSCGPSGKMPITRNSARKLLRSRGLNKKIQRETVDSFQGQIY
ATRGKKGEVFTITEHKPGTASQIYVTRGSAGATAADRRANLALPNSNSATHEGQVALTRD
QVLLEGRVAPQPQWGDDKVGGGWQVVTAGGRYSGATERL
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacccgctctgggctgcccgcctgggcgacgcgttgtcccatacctcgatgatg
gccgatattctcggcggtgtgctcgaggtcgcggccaacgtggcaatcaccgcactggcc
accgctgccgtggtcgccgccaccggcatcaccgtcgccaccggcgggctcggggcctgc
gtactgggcgcagtgatcggggtggtcgtcggcgtcgccatgagcaagaccggcgccgac
aagggcctgagcaagatgtgcgagggcatcggcaacgccctctttccgcccacagtgcag
gccaatatcctcagcggctccaccaacaccctgatcaactcgattcccgccgcccgcgct
gccggtgccgtaccgtcccatgtcgaagccgccggcacgccggacagcgagccgccccag
gaagccagctacctggatatcgccaagggcttctttgcccagatgtggcgacccacggtg
gcaacgcccgcccccggcgccgtgcccaagccgctggacctggtgacctgcaccaagcat
ccgccgatgccgcagcagtttctcgccgaagggtcgaaaaaggtcagcatcaacggccaa
cccgccgtgcgcagtggcgaccgcagtacctgcgatgccaccgtcgtgtcctccggactg
atctcgcccaacgtcaccatcggcggcggctcggtggtggtgcgcgagatccgcagcggc
aagacacccggcgtcggcctggccgtcaccgcgctgctgatgctcaagggcagcaagggc
aagttcttcagcaacctaccgtgcatgctgctggccggagtcaactccttcgtcaccagc
caggccatcggcgccctgaccaacgccatcgccggctcaccgaacccggtgcacgccgcc
accggcgccaaggtgctcggtggcctggacgatcaggacttcgccctgccgggactgctg
cgcctggattggcaacgcttctacaacagccgcgatgagcggcgcgacagcttgctcggc
gcgggctggagcgtgccctatgaagtcagcgtgcgcatcgaagcacaccccgagggcggc
gaacggctgatctacaccgacgaacaggcccgacgtatcgacatgggctcgatccccctg
ggcggcgcggtgttcagtgccggtgaaggcttgagtgtccgccggcatggcaatggtcag
ttattgatcgaaagcgacgacggcctctatcgactcttcgaggccctttccggcgagctc
aaccacttgcgcctgacgcaactgggcgaccgcaacgacaaccggatctacctcgactac
gacgagtcaggacggctggcgcggctgcgcgacaccttcgatcttgtacaggcacaactg
atctacagcacccaatggccccggcgggtcagccggatcgagcgcctgtacccggatcgc
tcgaacgagttgctggtcagctacacctacgacctgcgcggcgacctggcgcaagtgctg
gattccaccggccatgtgcaacggcgcttcgcctacgacgacgggcagcgtctggtggag
caccagctgtccgtcggcctgcgctgcttctaccagtgggcacaggtcgacggtcgcgaa
tggcgggtggtgcgccactggaccgacgagggcgatgaatataccttcgactacgatctc
gacgccgggaccacccgcatcaccgacaacctcaagcgcagcagtctccgacgttggagc
ccgcaacaccagatcaccgagtacaccgacaacctcggccagacctggcagttccagtgg
aacgacgaacgccagttgctcggtgccaccgatccccagggcggccagtaccagttcagc
tatgacgaagccggtaacctgtgtagcacccaggacccgctgggtcgtagcgaatcgacc
ctgtggctggaacactgggccttgccgctggtggaaaccgacgcagcgggtaacagctgg
cagttccgctatgacagccgtggcaactgcatccaggaaaccaacccgctggggcacgtc
acccgttatcgagtcgatgcccagggccagaccgtcgagatcatcgataccagcggcaaa
agcaagacgctgcactggagtcccctcggccagttgctcgaacatgtcgactgctccggc
tacccgacgcgcctgaactacgacgagcgcggcctgttgcggacggtcatcgacgccctg
ggcgaacgcacgcagtacgactacgacccccagggccgcctgctgggcagccacctgccg
gacggtcgcacgcatcagtaccagcgcaatgccgacggccagttgatcggttacaccgac
ccggccggacagaccgtcgcctaccgctacgatcggcgcggccaggtgcgccagcgtatc
gacgccggcggtcggcaggtgcagttcagctacgacgcctatggacgcctgcaggcgctg
accaatgaaaacggcgaaagctatcgcttcgcctgggatgccggcgaccgcctggtcgag
cagcaggacctggacggcagcggccgccgttacacctacaacgcccggaacgacgtcacc
cgcgtcgacaccctgcccgcaccccatggcagcggcctggcgctggtccccacagcgccg
gtcgaaccgattgtccaccacctggaacgcgatgccgccggacgcctgacagcgaaaatc
accgacgacggccgcaccgagtaccgctacgacgcgctggatcaactgacggcggtcacc
tttactgacaacgacggcaatgcacagggcttgggcttcgcctacgacgcccttggccag
ttgctcgaggaacagagcgcggcgggcagcctgcggcatcactacgacgaactgggcaac
ctgatccagacccagttgcccgatgaccgttggctcaatcggctgtactacggcagcggc
catctgcatcagatcaatctcgacggccgggtcatcagcgacttcgagcgcgaccgcctg
caccgcgaggtgctgcgtacccagggccagatcggcacccgcagcgagtacgaccgcgcc
ggacgcctgcgctcgcgcctgcgccgtcccctcagccagccttcggcgctgcccgcctcg
gtgcaacagcatttcgactacgaccccgccgatcacctgctcggccgcctcgaccaacag
ccggggggcacccatcggcagctgatgcaccacgacgccagcggtcgcatcgtcgccagc
caggacagcgtccagggccagaacgagaccttcgcctacgacgccgccgccaacctgctg
gacggcccccagggcggccgcgtgctgcacaacaagctgctgacctaccaggacaagcgc
taccgctacgacgccttcggccggatgatcgagaagcgcagcggtagccaccgggtccag
cgcttcgcctacgatgccgagcaccgcctgatcgaggtgcacaaccaggacggtgcacgg
gaaaccgtcgtgcgcatgcgctacgacccgctgggccgacgcatcgccaagaccgagcac
gacagccacggttaccccttgggtgaaacccacttcacctgggacggtttgcgcctgctg
caggaacatcggcacagcctgagcagcctctacctctacgccgacgacggccacgaaccg
ctggcccgggtcgacggcagcggcgccttgcagaaagtccgctattaccacaacgacctg
agcggcctacctgaacaactgacggaaagcgacggccatgtggtctggcaggcccgctac
cggatctggggcaataccgtcagcgaaacccgcgagccgtattacctggaagagcagaac
ctgcgcttccagggacaatacctggaccgggaaaccggcctgcactacaacaccttccgg
ttttacgacccggatatcgggcgcttcaccacccccgacccgatcggcctggccggtggc
atcaacctgtatgcctatgcaccgagcccgctgacgtgggtcgaccccctggggctaagc
tgtggtccttcgggtaaaatgccgattacccgtaactccgcacgcaaactgttgagaagc
cggggactgaacaagaaaatccagcgtgaaaccgtcgacagcttccaggggcagatctac
gccacccgaggcaagaaaggcgaggtgttcaccatcaccgagcacaaacccggtaccgct
tcgcaaatctatgtcacccgtggctcggcgggcgcgacggccgcggacagacgcgcgaac
ctggcactgcccaacagcaacagcgcgacacacgaaggccaggtcgccctcacccgcgac
caggtcctgctcgaaggccgagtggcgccacaaccgcaatggggcgatgacaaggtcggt
ggcggatggcaagtggtcactgccggcgggcgatattcaggagcaacggaacggctatga
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integrated database retrieval system
