Pseudomonas batumici: NUH87_17790
Help
Entry
NUH87_17790 CDS
T10437
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pbam Pseudomonas batumici
Pathway
pbam02025
Biofilm formation - Pseudomonas aeruginosa
pbam03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NUH87_17790 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NUH87_17790 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbam02044
]
NUH87_17790 (tssH)
Secretion system [BR:
pbam02044
]
Type VI secretion system
Imp/Vas secretion system core components
NUH87_17790 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Clp_N
NBD_SMAX1
Zeta_toxin
AAA_25
Sigma54_activat
TniB
nSTAND3
AAA_7
ATPase_2
AAA_14
NACHT
AAA_18
Torsin
CbiA
Hpr_kinase_C
SRP54
Motif
Other DBs
NCBI-ProteinID:
WVV60091
LinkDB
All DBs
Position
complement(3945632..3948313)
Genome browser
AA seq
893 aa
AA seq
DB search
MGEISRAALFGKLNSLAYKAIEAATVFCKLRGNPYVELSHWLHQLLQLQDSDLHRLIRQF
DIEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVLG
ILKTPSLRHALLALSPAFDKIKVEALSERFAEYVGDSPENHLGASDGFNAGAVPGEASGA
MAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS
PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEALEASVKLSHRYIPARQLPDK
SVSLLDTACARVAISLHAVPAEVDDSRRRIEALEIELQIIAREHAIGVDTAVRRSHSENL
LSTERERLAELETRWTDEKVLVDELLATRAELRESAGVVDSETDSEQGHALREKLVDLQQ
RLSALQGENPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLQKRIIGQDH
ALRMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMS
EFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFD
KGVMEDGEGRVIDFKNTLILLTTNAGTELISHLCKDAGNVPDPEEIAKALRQPLLEIFPP
ALLGRLVTIPYYPLSDTMLKAITRLQLGRIKKRVESTHKVAFDFDDEVVDLIVSRCTETE
SGGRMIDTILTNSLLPDMSREFLTRMLEGKALAGVRISERDNELHYQFSDASA
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatcagccgcgccgcgttattcggcaaactcaacagcctcgcctacaaggcc
atcgaagccgccacggtgttctgcaaactgcggggcaacccctatgtggaactgagccac
tggctgcaccagttgctgcaactgcaggactcggacctgcaccggctgatccgtcagttc
gacatcgaaccggcccgcctggcccgcgacctgaccgaggccctggaccgcctgccgcgc
ggctcgacctcgatcaccgacctgtcgtcccacgtcgaagaagccgtggaacgcggctgg
gtctacggcagcctgatgttcggcgaaagccaggtgcgcaccggctacctggtgctcggc
atcctcaagaccccgagcctgcgccatgccctgctggcgctgtcgcctgcgttcgacaag
atcaaggtcgaggccctgagcgagcgcttcgccgagtacgtcggcgattcgccggaaaac
cacctcggcgccagcgacggtttcaacgccggtgcggtgccgggcgaagccagcggcgcc
atggcccccagcgccatgggcaagcaggaagcgctcaagcgtttcaccgtggacctgacc
gagcaggcccgtagcggcaagctcgaccccatcgtcgggcgcgatgaagagatccgccag
ttggtggatatcctcatgcgccggcgccagaacaacccgatcctcactggcgaggccggt
gtcggcaagaccgccgtggtcgaaggcttcgccctgcgcatcgtcgccggcgacgtgccg
ccggccttgaaggacgtcgaactgcgcagcctcgacgtcggcctgttgcaagccggcgcg
agcatgaagggcgagttcgaacagcgcctgcgccaggtcatcgaagacgtccaggcctcg
cccaagccgatcatcctgttcatcgacgaagcccacaccctggtcggtgccggtggcgcc
gccggtaccggtgacgcggccaacctgctgaaaccggccctggcccgcggcactctgcgc
accgtggccgccaccacctgggccgagtacaagaagcacatcgagaaagacccggcgctg
acccgtcgtttccaggtggtgcaggtggccgaaccgtcggaagacaaggccctgctgatg
atgcgcggcgtcgcctcgaccatggaaaaacaccaccaggtgcagatcctcgacgaagcg
ctggaggcctcggtcaagctgtcgcaccgctatattccggcgcgccagttgccggacaaa
tccgtcagcctgctggacaccgcctgcgcccgggtcgccatcagcctgcacgcggtgccc
gcggaagtggacgacagccggcggcgcatcgaagcgctggaaatcgagttgcagatcatt
gcccgcgagcatgccatcggcgtcgataccgccgtgcgccgcagccacagcgagaacctg
ctgagcaccgagcgcgagcgcctggccgaactggaaacgcgctggaccgacgagaaagtc
ctggtggacgaactgctcgccacccgcgccgagctgcgcgaaagtgccggcgtggtggac
agcgagaccgacagcgaacagggccacgcactgcgggaaaaactggtagatctgcagcag
cgcctcagcgccctgcaaggcgaaaacccgttgatcctgccgaccgtggactaccaggcg
gtggcctcggtggtggccgactggaccggtattccggtgggccgcatggcccgcaatgaa
ctggaaaccgtgctcaacctcgaccagcacctgcaaaagcgcatcatcggccaggaccat
gcgctgcggatgatcgccaagcgcatccagacttcccgcgccggcctcgacaacccgagc
aagccgatcggggtgttcatgcttgccggtacctccggcgtgggcaagaccgaaaccgcc
ctggccctggccgaagccatgtacggcggcgaacagaacgtcatcaccatcaacatgagc
gagttccaggaggcccacaccgtctccaccctcaagggcgccccgcccggctatatcggc
tacggcgaaggtggcgtgctgaccgaagcggtacggcgcaagccctacagcgtggtgctg
ctggacgaggtggaaaaggcccacccggacgtgcacgagatcttcttccaggtgttcgac
aagggcgtgatggaggacggtgaaggccgggtgatcgacttcaagaacaccctgatcctg
ctcaccaccaacgccggtaccgagctgatctcgcacctgtgcaaggacgccggcaacgtg
ccggacccggaagagatcgccaaggccctgcgccagccgctgctggagattttcccgccg
gcgctgctggggcgcctggtgaccattccgtattacccgctgagcgacaccatgctcaag
gcgatcacccgcttgcagctgggccggatcaagaagcgcgtggaaagcacccacaaggtg
gcgttcgatttcgacgacgaggtcgtcgacctgatcgtttcgcgttgcaccgagaccgaa
agcggagggcggatgatcgacaccatcctgaccaacagcctgctgccggacatgagtcgc
gagttcctcacccgcatgctcgaaggcaaggcgctggcgggggtacgaatcagcgagcgg
gataacgaattgcactaccagttcagcgacgcgagcgcctga
DBGET
integrated database retrieval system
