KEGG   Pseudomonas batumici: NUH87_17800
Entry
NUH87_17800       CDS       T10437                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
pbam  Pseudomonas batumici
Brite
KEGG Orthology (KO) [BR:pbam00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pbam02044]
    NUH87_17800 (tssF)
Secretion system [BR:pbam02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NUH87_17800 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: WVV60093
LinkDB
Position
complement(3949322..3951181)
AA seq 619 aa
MNPRLLDLYNQELQHVRESAAEFAKEYPKIAGRLTLSGLDCADPYVERLLEGFAYLTARV
QLKLNAEYPTFTHNLLEIAYPHYLAPTPSMTVVQLQTDPDEGSLAGGFTLPRDSVLRATL
GKDTQTSCEYRSAHAVTLWPLQVSHAEYFGNPSAVLGRLAASEPKAKAGLRLTLRTGAEL
PFNQLDLDSLPLYLNGADEQPFRLYEQLLGNACAVFARAPGGDWVERLPGDALRACGFDD
REAAMPVVAQAFQGYRLLQEYFALPQRYLFVEFAELGRAVKRCAGQELELIVLFERFDPS
LENSVGAAQFVPFCTPAINLFPRRVDRIHLSERVNEHHVIADRTRPMDFEIHSLTGVTGH
GTGPDQPFLPFYAVRDPSRYGRDQAYYTLRREPRVLSSEQRRKGTRSTYVGSETFISLVD
SRQAPYRHDLRQLGVSALCTNRDLPLFMNVGTGKSDFTLADSAPVSAIRCLAGPSRPRAS
HAHDNQAWRLISQLSLNYLSLSEAGQGAAALRELLRLYGESNDAALQLQIEGLREVSSKP
CTRRLPMPGPIVFGRGLEITLEFDENAFRGTGVFLLGAVFERFLARYVSINSFTETVIRT
TERGEIMRWKAKPGRRPTL
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgaacccgcgcctgctcgacctgtacaaccaggaactgcaacacgtgcgcgaaagcgcc
gccgagttcgccaaggaatacccgaagatcgccggccggctgacgctgtccgggctcgac
tgcgccgacccctacgtcgagcgcctgctggaaggtttcgcctacctcaccgcccgggtg
cagctcaagctcaatgccgagtacccgaccttcacccacaacctgctggaaatcgcctac
ccgcattacctggcgccaacgccttcgatgaccgtggtccagctgcagaccgacccggac
gaaggctccctggccggcggtttcaccctgccccgcgacagcgtattgcgcgccaccctg
ggcaaggacacccagacctcctgcgaataccgcagcgcccatgccgtgacgctgtggccg
ttgcaggtcagccatgcggaatacttcggcaacccgtcggccgtgctcggccgcctggcc
gccagcgaaccgaaagccaaggccgggctgcgcctgaccctgcgcaccggcgccgagttg
ccgttcaaccagctcgacctggacagcctgccgctctacctcaacggtgccgacgagcag
ccgtttcgcctgtatgagcaactgctgggcaatgcctgcgcggtgttcgcccgtgccccg
ggcggcgactgggtcgagcgcctgcccggcgacgccctgcgcgcctgcggtttcgacgac
cgcgaagcggcgatgccggtagtggcccaggcgttccagggctatcggctgttgcaggaa
tacttcgccctgccccagcgctacctgttcgtcgaattcgccgaactgggccgcgcggtc
aagcgctgcgccggccaggagctggaactgatcgtgcttttcgagcgcttcgacccgagc
ctggaaaacagcgtcggcgccgcgcagttcgtgcccttctgcaccccggcgatcaacctg
ttcccgcgccgcgtggaccgtatccacctgtccgagcgggtcaacgaacaccacgtgatc
gccgaccgtacccggcccatggacttcgagatccactcgctgaccggcgtcaccggccac
ggcaccgggcccgaccagccgttcctgccgttctatgccgtgcgcgatccgtcgcgctat
ggccgcgaccaggcctactacaccctgcgccgcgaaccccgggtgctgtccagcgaacaa
cggcgcaaaggcacccgctcgacctatgtcggcagcgaaaccttcatcagcctggtggac
agccggcaggcgccctaccgccacgacctgcgccaactgggcgtcagcgccctgtgcacc
aaccgcgacctgccgctgttcatgaacgtcggcaccggcaagagcgacttcaccctggct
gacagtgcgccggtctcggcgatccgctgtctggccgggcccagccggccgcgggccagc
catgcccacgacaaccaggcctggcgcctgatcagccagttgtcgctgaactacctgtcg
ttgagcgaagccggccaaggcgccgccgccctgcgcgaactgctgcgcctgtacggcgag
agcaacgatgccgccctgcaattgcagatcgagggcctgcgcgaggtcagcagcaaaccc
tgcacccggcgcttgccgatgcccgggccgatcgtcttcggccgtggcctggagatcacc
ctggaattcgacgaaaacgcgtttcgcggcaccggggtgttcctcctcggcgccgtgttc
gaacgcttcctggcacgctacgtgtcgatcaacagttttaccgagacggtgatccgtacc
accgaacgcggcgagatcatgcgatggaaagccaagcccggacgccgtccgaccctgtga

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