Pseudomonas batumici: NUH87_17840
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Entry
NUH87_17840 CDS
T10437
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pbam Pseudomonas batumici
Pathway
pbam02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NUH87_17840 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbam02044
]
NUH87_17840 (tssK)
Secretion system [BR:
pbam02044
]
Type VI secretion system
Imp/Vas secretion system core components
NUH87_17840 (tssK)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
WVV60100
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Position
3958104..3959438
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AA seq
444 aa
AA seq
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MSWNNRVVWSEGMFIGTQHFQQHDRYLENLIDARSRPLAVGAWGFSELLIDQGLLAQGKL
AIVSARGLLPDGTPFNIPHDDLAPSPLTIDEHLRDGLVYLALPLKRAGSRDTVDEGEELG
GARYLSQVREVRDDNAPFENRAPVALGSRALRLLTAADGMGDYAAIGLVRVKEKRADRAL
VLDDSYVPPVLDVAASKPLTAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFMLLQL
VNRAQPLIGHLNQISPLHPERLYSELVSLAGEFSTFSSSGRRPAAFPAYQHDDLALSFAP
VMQALREALSMLIDSKATPIPIVEKAYGIHVAMLADRSLIDNASFILVVRADIPSETLRG
RFAQQSKIGSVEHIRDLVNLQLPGIGLLPLPVAPRQIPFHAGSTYYELDRGSEHWKQLVN
SGGFAFHVAGEFPGLNLAFWAIRG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaacaatcgagtggtctggtcggaaggcatgttcatcggaacgcagcacttc
cagcagcatgaccgttatctggaaaacctgatcgacgcccgcagccggccattggccgtc
ggcgcctggggtttttccgagctgctgatcgaccagggcctgctggcccagggcaagctg
gccatcgtctcggcccggggcctgctgccggacggcacacccttcaacatcccccacgat
gacctcgcgccgagcccgctgaccatcgacgagcacctgcgcgacggcctggtctacctg
gccttgccgctcaagcgcgccggctcacgggacaccgtcgacgaaggcgaggaactgggc
ggggcgcgctacctgagccaggtccgcgaagtgcgcgacgacaacgcgccgttcgagaac
cgcgcgccggtggccttgggttcgcgggccctgcgtctgttgaccgccgcggatggcatg
ggcgattacgccgccatcggcctggtgcgggtcaaggaaaagcgcgccgatcgggccctg
gtcctcgatgacagctatgtgccgccggtgctcgatgtggcggcgagcaagccgctgacg
gcgtttcgcagcgaactgctgggcctgctgcaccagcgtggcgaagccctggccgggcgc
gtggtggcctcgggcgccggcggtgcctcggaaatcgccgatttcatgctgctgcaactg
gtcaaccgcgcccagccgctgatcggccacctgaaccagatcagccccttgcacccggag
cgcctgtacagcgagctggtgagcctggccggcgaattttccaccttttccagcagcggt
cggcgcccggcggcgttccccgcgtatcaacacgatgacctggcgttgagcttcgccccg
gtcatgcaggccctgcgcgaagccctgtcgatgttgatcgacagcaaggcgacgccgatt
ccgattgtcgagaaagcctatggcatccatgtggcgatgctcgcggaccgcagcctgatc
gacaacgccagcttcatcctggtggtgcgcgccgatatccccagcgaaaccctgcgcggt
cgcttcgcccagcagagcaagatcggttcggtggagcacatccgcgacctggtcaacctg
caattgccgggtatcggcctgttgccgctgccggtggcgccgcggcagattccgttccat
gccgggtccacctactacgaactcgaccggggcagtgagcactggaagcagctggtgaac
tccggcggtttcgccttccatgttgccggcgagtttcccggcttgaacctggccttctgg
gccatccgaggataa
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