KEGG   Pseudomonas batumici: NUH87_18240
Entry
NUH87_18240       CDS       T10437                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pbam  Pseudomonas batumici
Pathway
pbam00300  Lysine biosynthesis
pbam00470  D-Amino acid metabolism
pbam01100  Metabolic pathways
pbam01110  Biosynthesis of secondary metabolites
pbam01120  Microbial metabolism in diverse environments
pbam01230  Biosynthesis of amino acids
Module
pbam_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pbam00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    NUH87_18240 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    NUH87_18240 (lysA)
Enzymes [BR:pbam01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     NUH87_18240 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N DUF6484
Other DBs
NCBI-ProteinID: WVV60175
LinkDB
Position
complement(4045001..4046248)
AA seq 415 aa
MEAFDYRGGELFAEGVALSSIAERFGTPTYVYSRAHIEAQYNAYANALAGTPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGSADKIVFSGVGKTRDDMRRALEVGVH
CFNIESTDELERLQVVAAELGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVLGVDCHIGSQLTTLEPFLDALDRLLALVDRLGECGIYLQHIDLGGGV
GVRYRDEEPPLVADYIKAVRERTAGRDLALMFEPGRYIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYEAWMDVSAVRPREGAGRVYDIVGPICETGDFLAKERQLALEEGD
LLAVHSAGAYGFVMSSNYNTRGRVAEVLVDGQQMFEVRRRETVAELYAGESLLPE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggaagcttttgactaccgtggcggtgagctgttcgcggaaggtgtagctttgtcctcc
attgccgagcgcttcggcacgccgacctacgtctactcccgcgcccacatcgaggcgcag
tacaacgcctatgccaatgccctcgcaggcacgccacacctggtgtgcttcgcggtgaag
gccaactccaacctgggcgtgctgaacgtcctggcgcggctcggcgccggtttcgacatc
gtttcccgtggcgaactggaacgtgtcctggccgccggcggcagcgcggacaagatcgtc
ttttccggcgtcggcaagacccgcgacgacatgcgccgcgccctggaagtcggcgtgcac
tgcttcaacatcgagtccaccgacgagctggagcgcctgcaagtggtggcggccgagctg
ggcgtgcgggcaccgatctcgctgcgggtcaacccggacgtcgacgccggcacccatccg
tacatctccaccgggctcaaggaaaacaagttcggcatcgccattgccgatgccgaggat
gtctacatccgcgccgcccagctgccgaacctggaagtactgggcgtcgattgccatatc
ggttcgcaactgaccacccttgagccgttcctcgatgccctcgaccgcctgctggcgctg
gtcgaccggctcggcgaatgcggcatctacctgcagcacatcgacctcggtggcggcgtg
ggcgtacgctatcgcgacgaagagccgccgctggtggccgactacatcaaggccgtgcgc
gagcgcaccgccggtcgcgacctggcgctgatgttcgagccgggccgctacatcgtcgcc
aatgccggcgtgctgctgacccaggtcgagtacctcaagcacaccgaacacaaggatttc
gccatcgtcgacgcggcgatgaacgacctgatccgcccggccctgtacgaggcctggatg
gacgtcagcgccgtgcgtccgcgcgaaggtgccggccgtgtctacgacatcgtcgggccg
atctgcgagaccggcgacttcctggccaaggaacgtcagctggccctcgaggaaggcgat
ctgctggccgtgcactcggccggcgcctatggtttcgtcatgagctccaactacaacact
cgcggccgcgtggccgaagtgctggtggatggccaacagatgttcgaagtgcgtcgtcgc
gagacggttgccgagctgtatgccggcgaaagcctgctgccggagtaa

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