Pseudomonas batumici: NUH87_18240
Help
Entry
NUH87_18240 CDS
T10437
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pbam Pseudomonas batumici
Pathway
pbam00300
Lysine biosynthesis
pbam00470
D-Amino acid metabolism
pbam01100
Metabolic pathways
pbam01110
Biosynthesis of secondary metabolites
pbam01120
Microbial metabolism in diverse environments
pbam01230
Biosynthesis of amino acids
Module
pbam_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NUH87_18240 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NUH87_18240 (lysA)
Enzymes [BR:
pbam01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NUH87_18240 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF6484
Motif
Other DBs
NCBI-ProteinID:
WVV60175
LinkDB
All DBs
Position
complement(4045001..4046248)
Genome browser
AA seq
415 aa
AA seq
DB search
MEAFDYRGGELFAEGVALSSIAERFGTPTYVYSRAHIEAQYNAYANALAGTPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGSADKIVFSGVGKTRDDMRRALEVGVH
CFNIESTDELERLQVVAAELGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVLGVDCHIGSQLTTLEPFLDALDRLLALVDRLGECGIYLQHIDLGGGV
GVRYRDEEPPLVADYIKAVRERTAGRDLALMFEPGRYIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYEAWMDVSAVRPREGAGRVYDIVGPICETGDFLAKERQLALEEGD
LLAVHSAGAYGFVMSSNYNTRGRVAEVLVDGQQMFEVRRRETVAELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaagcttttgactaccgtggcggtgagctgttcgcggaaggtgtagctttgtcctcc
attgccgagcgcttcggcacgccgacctacgtctactcccgcgcccacatcgaggcgcag
tacaacgcctatgccaatgccctcgcaggcacgccacacctggtgtgcttcgcggtgaag
gccaactccaacctgggcgtgctgaacgtcctggcgcggctcggcgccggtttcgacatc
gtttcccgtggcgaactggaacgtgtcctggccgccggcggcagcgcggacaagatcgtc
ttttccggcgtcggcaagacccgcgacgacatgcgccgcgccctggaagtcggcgtgcac
tgcttcaacatcgagtccaccgacgagctggagcgcctgcaagtggtggcggccgagctg
ggcgtgcgggcaccgatctcgctgcgggtcaacccggacgtcgacgccggcacccatccg
tacatctccaccgggctcaaggaaaacaagttcggcatcgccattgccgatgccgaggat
gtctacatccgcgccgcccagctgccgaacctggaagtactgggcgtcgattgccatatc
ggttcgcaactgaccacccttgagccgttcctcgatgccctcgaccgcctgctggcgctg
gtcgaccggctcggcgaatgcggcatctacctgcagcacatcgacctcggtggcggcgtg
ggcgtacgctatcgcgacgaagagccgccgctggtggccgactacatcaaggccgtgcgc
gagcgcaccgccggtcgcgacctggcgctgatgttcgagccgggccgctacatcgtcgcc
aatgccggcgtgctgctgacccaggtcgagtacctcaagcacaccgaacacaaggatttc
gccatcgtcgacgcggcgatgaacgacctgatccgcccggccctgtacgaggcctggatg
gacgtcagcgccgtgcgtccgcgcgaaggtgccggccgtgtctacgacatcgtcgggccg
atctgcgagaccggcgacttcctggccaaggaacgtcagctggccctcgaggaaggcgat
ctgctggccgtgcactcggccggcgcctatggtttcgtcatgagctccaactacaacact
cgcggccgcgtggccgaagtgctggtggatggccaacagatgttcgaagtgcgtcgtcgc
gagacggttgccgagctgtatgccggcgaaagcctgctgccggagtaa
DBGET
integrated database retrieval system