Pseudomonas batumici: NUH87_18790
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Entry
NUH87_18790 CDS
T10437
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pbam Pseudomonas batumici
Pathway
pbam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NUH87_18790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbam03019
]
NUH87_18790
Messenger RNA biogenesis [BR:
pbam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NUH87_18790
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
WVV60279
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All DBs
Position
4157802..4158281
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AA seq
159 aa
AA seq
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MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPDETPEDALYRELNEEVGL
EREDVQILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLLSNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLARD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaccccgatggtttccgtcctaatgtcgggataattctgacgaatgatgccggt
caggtcctatgggcgcgccggatcaatcaagatgcatggcagtttccgcaaggcgggatc
aatcctgacgaaacgcctgaagacgctttgtaccgcgaattgaacgaagaagtcggcctg
gaacgtgaagatgtgcaaattctggcctgtacccggggctggttgcgctatcgtttgccg
caacgtctggtgcgtacccacagccaaccgctgtgcatcggccagaaacagaaatggttt
ctcctgcgcctgctctccaacgagcagcgggtgcggatggatttgaccggtaaaccggag
ttcgatggctggcgctgggtcagctattggtacccgttgggccaggtggtgacattcaag
cgcgaggtctaccgtcgcgcgctcaaagagcttgccccgcgcctgttggcgcgcgactga
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