Pseudomonas batumici: NUH87_19510
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Entry
NUH87_19510 CDS
T10437
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
pbam Pseudomonas batumici
Pathway
pbam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NUH87_19510 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbam02000
]
NUH87_19510 (choX)
Transporters [BR:
pbam02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
NUH87_19510 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
DUF3325
Motif
Other DBs
NCBI-ProteinID:
WVV60417
LinkDB
All DBs
Position
complement(4309579..4310523)
Genome browser
AA seq
314 aa
AA seq
DB search
MKRLISRCALALTGTALLSTGVMAAEQASCQNVRLGVVNWTDVIATSAMTQVLLDGLGYQ
VKQTSASQQIIFAGIRDQRLDMFLGYWNPLMTQTITPFVDAKQVKVLAEPSLKDARATLA
VPTYLADKGLKTFADIAKFEKELGGKIYGIEPGSGANTQIKEMIAKNQFGLGKFQLVESS
EAGMLSAVDRAVRRKEAVVFFGWAPHPMNVNVQMTYLTGSENALGPNEGMATVWTVTAPT
YAEQCPNVNKLLSNLTFSAADESRMMQPLLDHKDALESAKQWLKDHPQDKARWLEGVTTF
DGKPAAENLQLTSK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgactgatcagccgctgtgcgctcgcactcaccggtaccgcgctcctgagcaca
ggagtcatggccgcggagcaagcctcctgccagaacgttcgcctcggtgtggtcaactgg
accgacgtcatcgccaccagcgccatgacccaggtgctgctcgacggcctgggctaccag
gtcaagcagaccagcgcatcccagcagatcatcttcgccggtatccgcgaccagcgcctg
gacatgttcctcggctactggaacccgctgatgacccagaccatcaccccgttcgtcgac
gccaagcaggtcaaggtcctggccgaaccgagcctcaaggacgcccgcgcgaccctggcc
gtgcccacctacctggccgacaagggcctgaagaccttcgccgacatcgccaagttcgag
aaagaactgggcggcaagatctacggcatcgagcccggctccggcgccaacacccagatc
aaggaaatgatcgccaagaaccagttcggcctgggcaagttccagttggtggagtccagt
gaggccggcatgctctcggcggtggatcgtgccgtgcgccgtaaggaagccgtggtgttc
ttcggctgggcgccgcacccgatgaacgtcaacgtgcagatgacctatctcaccggtagc
gaaaacgcgttgggtccgaacgaaggcatggccaccgtctggaccgtcaccgcgccgacc
tatgccgaacaatgcccgaacgtgaacaagttgctgagcaacctgaccttcagcgccgcc
gacgagagccgcatgatgcaaccgctgctcgaccacaaggacgccctcgagtcggccaaa
cagtggctcaaggatcacccgcaagacaaggcccgctggctggaaggtgtcaccaccttc
gatggcaagccagccgctgaaaacctgcaattgaccagtaaataa
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