Pseudomonas batumici: NUH87_19615
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Entry
NUH87_19615 CDS
T10437
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pbam Pseudomonas batumici
Pathway
pbam00260
Glycine, serine and threonine metabolism
pbam00460
Cyanoamino acid metabolism
pbam00630
Glyoxylate and dicarboxylate metabolism
pbam00670
One carbon pool by folate
pbam00680
Methane metabolism
pbam01100
Metabolic pathways
pbam01110
Biosynthesis of secondary metabolites
pbam01120
Microbial metabolism in diverse environments
pbam01200
Carbon metabolism
pbam01230
Biosynthesis of amino acids
pbam01240
Biosynthesis of cofactors
pbam04981
Folate transport and metabolism
Module
pbam_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NUH87_19615
09102 Energy metabolism
00680 Methane metabolism
NUH87_19615
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NUH87_19615
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NUH87_19615
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NUH87_19615
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NUH87_19615
Enzymes [BR:
pbam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NUH87_19615
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WVV60437
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Position
4336802..4338055
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AA seq
417 aa
AA seq
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MFSKQDQIQGYDDALMAAMNAEEQRQEDHIELIASENYTSKRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANGAVYLALLQAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDTATGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRQIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LAKANEEIEKKLNAAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKVYQQQVIDNAQAMAG
VFIKRGYDVVSGGTDNHLFLVSLIRQGLTGKEADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVTQCVELAGWICDILDNLGDADVEANVAKHVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagaccagatccagggttatgacgatgcactgatggcggccatgaat
gccgaggagcagcgtcaggaagatcacatcgagctgatcgcgtcggaaaactacaccagc
aagcgcgtcatgcaggcccagggcagcggcctgaccaacaaatacgccgaaggctatccg
ggcaagcgctactacggtggctgcgagcacgtggacaaggtcgaggccctggccatcgag
cgcgccaagcaactgttcggcgccgattacgccaacgtccagccgcactccggctcctcg
gccaacggcgccgtgtacctggccctgctgcaggccggcgacaccatcctgggcatgagc
ctggcccatggcggtcacctgacccacggtgccaaggtgtcgtcctcgggcaagctgtac
aacgccgttcaatacgggatcgacaccgcgaccggcctgatcgactacgatgaagtcgag
cgcctggcggtcgagcacaaaccgaagatgatcgtcgccggtttctcggcctactcgaaa
acccttgatttcccacgcttccgtcagatcgccgacaaggtcggtgcgctgctgttcgtc
gacatggcccacgttgccgggctggtcgctgctggcctctacccgaacccgatcccattc
gccgacgtggtcaccaccaccacccacaagaccctgcgcggtccgcgtggcggcctgatc
ctggccaaggccaacgaagagatcgagaagaaactcaacgccgcggtgttcccgggcgcc
cagggcggcccgctgatgcacgtgatcgccgccaaggccgtgtgcttcaaggaagcgctg
gagccgggcttcaaggtctatcagcagcaagtgatcgataacgcccaggcgatggcgggc
gtatttatcaaacgtggctacgatgtagtgtccggcggtaccgacaaccacctgttcctg
gtcagcctgatccgtcagggcctgaccggcaaggaggccgatgccgccctgggccgtgcc
catatcaccgtgaacaagaacgccgtgccgaacgacccgcagtcgccgttcgtcacttcg
ggtctgcgcatcggtaccccggccgtcaccacccgtgggttcaaggtgacccagtgtgtc
gaactggccggttggatctgcgacatcctcgacaacctcggcgatgccgatgtcgaagcg
aacgtcgccaagcacgtggcagccctgtgcgcggacttcccggtttatcgctga
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