Pseudomonas batumici: NUH87_20195
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Entry
NUH87_20195 CDS
T10437
Name
(GenBank) LPS-assembly protein LptD
KO
K04744
LPS-assembly protein
Organism
pbam Pseudomonas batumici
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbam02000
]
NUH87_20195
Transporters [BR:
pbam02000
]
Other transporters
Pores ion channels [TC:
1
]
NUH87_20195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_2
LptD_N
OstA_2
PPARgamma_N
LptC
Motif
Other DBs
NCBI-ProteinID:
WVV60549
LinkDB
All DBs
Position
complement(4453100..4455925)
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AA seq
941 aa
AA seq
DB search
MALKSPAFRKKFPLLVTGGLLALQPLATPFAVAAEQFDCAASASGSWDCAPKTTAAPLPP
RPVHDTNAVASGAAAPADSGSSSGKAAGPVLVTEAKGRGLQSRSADYSHLDWVPREKLTP
AQLAEAGPYCSGSYIEPIRPGMNDTTNKSDSPTFIGAKASRYEQDKQVATLAGDVVMRQG
SMQVEADEASLYQAENRGELNGNVRVRDQGALLVGDHAEVQLDTGESQVDNAEYVMHKSH
VRGNALYAKRAENAIIRLKDGTYTTCEPNSNAWQLKGNNITLNPATGFGTATNVTLRVKD
IPVFYTPYIYFPIDDRRQSGFLPPSLSSDSTSGLNLTTPYYFNLAPNYDATLYPHYMTKR
GLLTEGEFRYLTKSTEGQFGGAFLNDESNDRAKQTDSTKDRYMINWQHKGGLDSRVLTTV
DYTKISDPYYFQDLQTYQIGVKSADYVNQQAMATYRGDDFNAQLNVQAFELASVAVITPY
NRLPQITFAGVLPYHPEGLNFTYETEAVRFERSLQSGNYLDKDGGPFNTDGTVGTPRLDT
NVTGLARANGDRLNLKPGISLPLNSTYGYVIPSLKYQYTQYDLDLSSLGQTQIQQAQAAL
GANYVGGVYDRSQSRGVPIASIDSGLYFDRDTQLFGTNYRQTLEPRLFYLYVPEKDQKDI
PVFDTAEYSFNYASLFRENRFSGNDRVGDENKLSLGVTSRWIEDNGFERQRISVGQAYYF
KDRTVQLPGVNFTTRADAKTNVSPYALEYAYNFNRDWRATADYNWDPESHSPRSGSAMFH
YQPEDNPNKVVNAGYRYRNDQVIYNQNTGQWQFGGDYGTPGTANFVKDYYKIEQHDFSVI
WPVVPQWNVISRWQYDYNRNRTLEAFGGFEYDNCCWKMRLINRYWVQYDEFSQLAPQNER
GDHGIFLQFVLKGLGGVMGNKVESFLDKGIQGYREREDQAF
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaaatcccccgcgtttcgtaaaaaattcccgttgctggtgactggcggtttg
ctggctctgcaacctcttgccaccccgttcgcggtcgccgcggagcagtttgactgcgcc
gcctcggcttccggttcctgggactgcgcccccaagaccactgcggccccgttgccgcca
cgtcccgtgcatgacaccaatgccgtggcctcgggcgctgcagccccggcggacagcggt
tccagcagcggcaaggccgccggcccggtactggtcaccgaggccaagggtcgcggcctg
cagtcgcgcagtgccgactacagtcacctcgactgggtcccacgtgagaagctgacgccc
gcacagttggccgaagccggtccttactgctctggttcctatatcgaaccgattcgtcct
ggcatgaatgacacgacgaataaaagtgattcgccgaccttcatcggggccaaggcctcg
cgttacgaacaggataagcaggtcgccacactggccggcgacgtggtcatgcgccagggc
agtatgcaggtcgaggccgacgaagccagcctgtaccaggccgaaaaccgtggcgagctg
aacggcaacgttcgtgttcgcgaccagggtgccctgctggtcggtgaccatgccgaggtg
cagctggacacgggcgagtcgcaggtcgacaacgccgaatacgtgatgcacaagtcgcat
gtgcgcggcaacgcgctgtacgccaagcgcgccgagaatgcgatcattcgcctcaaggac
ggtacgtacaccacgtgtgagccgaacagcaacgcctggcagctcaagggcaacaacatc
accttgaaccccgcgaccggcttcggtacggccaccaacgtgaccttgcgggtcaaggac
attccggtcttctataccccgtacatctacttcccgatcgatgaccgtcgccagtccggc
ttcctgccgccaagcctctccagcgacagcacctcgggcttgaacctgaccacgccttac
tacttcaacctggcaccgaactacgacgccacgttgtatccgcactacatgaccaagcgc
ggactgttgaccgaaggcgagttccgctatctgaccaagtccaccgaagggcagttcggc
ggcgcgttcctgaacgacgagagcaacgatcgcgccaaacagacggactccaccaaagat
cgctacatgatcaactggcagcacaagggcgggctggattcgcgggtactgaccacggtc
gactacaccaagatcagcgatccgtactacttccaggacttgcagacctaccagatcggc
gtcaagagcgctgattatgtgaatcagcaggcgatggcgacctatcgcggtgacgatttc
aacgcccagttgaacgtgcaggcctttgagttggcgagcgtggcggtcatcacaccttac
aaccgcctgccacagatcactttcgccggtgtcctgccttatcatccggaaggcctcaat
ttcacctacgaaactgaagctgttcgcttcgagcgcagcttgcagtcgggtaactatctc
gacaaggacggcgggcctttcaatactgacggcacagtcgggacgccgcgcctggacacc
aacgtgaccggcctggcccgtgccaacggtgaccgcctgaacctgaaaccaggtatcagc
ctgccgctcaactcgacgtatggctatgtcataccatcgctgaaataccagtacacccaa
tacgatctggacctgagctctctggggcaaacccagatccagcaggctcaggccgcgctc
ggcgcgaattacgtcggcggggtctacgaccgctcgcaaagccgcggcgtccctatcgcc
agtatcgacagcggcttgtacttcgaccgcgacacccaattgttcggcaccaactaccgc
cagaccctggaacctcgcctgttctatctctatgttccggagaaggaccagaaagacatt
ccagtgttcgacaccgccgaatacagcttcaactatgcgtcgctgttccgtgaaaaccgc
ttctccggcaatgaccgcgtcggcgacgagaacaaactgtccctgggcgttaccagccgc
tggatcgaggacaacggtttcgaacgtcagcgcatcagtgttggccaggcgtactacttc
aaggaccgcacggtgcagttgccgggtgtcaacttcaccacccgcgccgacgccaagacc
aacgtgtcgccgtacgccctggagtacgcctacaacttcaaccgcgactggcgtgcaacc
gccgactacaactgggacccggaaagccacagcccgcgttccggcagtgcgatgttccac
taccagcctgaagacaacccgaacaaggtggtcaacgccggctatcgctatcgcaatgac
caggtgatctacaaccagaacaccggccaatggcagttcggtggtgactacggcacccca
ggcaccgcgaacttcgtgaaggactactacaagatcgagcagcacgacttctcggtcatc
tggcctgtcgttccgcagtggaacgtcatcagccgctggcagtacgactacaaccgcaac
cgtacactggaagccttcggcggcttcgagtacgacaactgctgctggaaaatgcgcctg
atcaaccgctactgggtccagtatgacgagttcagtcaactggctccgcaaaacgaacga
ggcgaccacggtatcttccttcagtttgtactgaagggcctgggtggcgtcatgggcaac
aaggtcgagagcttcctcgacaaaggcatccaaggttatcgtgaacgtgaagatcaagct
ttctga
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