Pseudomonas batumici: NUH87_20810
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Entry
NUH87_20810 CDS
T10437
Symbol
dxs
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
pbam Pseudomonas batumici
Pathway
pbam00730
Thiamine metabolism
pbam00900
Terpenoid backbone biosynthesis
pbam01100
Metabolic pathways
pbam01110
Biosynthesis of secondary metabolites
Module
pbam_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
NUH87_20810 (dxs)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
NUH87_20810 (dxs)
Enzymes [BR:
pbam01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
NUH87_20810 (dxs)
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Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
TPP_enzyme_C
Transketolase_N
Motif
Other DBs
NCBI-ProteinID:
WVV60661
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Position
complement(4570056..4571954)
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AA seq
632 aa
AA seq
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MPTTFHEIPRKRPTTPLLDRADTPAGLRRLGEAELETLADELRQELLYSVGQTGGHFGAG
LGVIELTIALHYVFDTPDDRLVWDVGHQAYPHKILTGRRERMRSLRQKDGLAAFPRRSES
EYDTFGVGHSSTSISAALGMAIAARLQNSDRKAIAVIGDGALTAGMAFEALNHAPEVDAN
MLVILNDNDMSISRNVGGLSNYLAKILSSRTYASMREGSKKVLSRLPGAWEIARRTEEYA
KGMLVPGTLFEELGWNYIGPIDGHDLPTLIATLRNMRDLKGPQFLHVVTKKGKGFAPAEV
DPIGYHAITKLEPLDAPAAAPKKASGPKYSGVFGEWLCDMAAADPRLVGITPAMKEGSDL
VAFSERFPLRYFDVAIAEQHAVTFAAGMACEGAKPVVAIYSTFLQRGYDQLVHDVAVQNL
DVLFAIDRAGLVGEDGPTHAGSFDLSYLRCIPGMLVMTPSDENELRKMLTTGHLYNGPAA
VRYPRGTGPNAPIEKDLEPIEIGKGVVRRRGSKVALLVFGVQLTEALIVAEKLDATVVDM
RFVKPLDEALVREIAGSHELLVTIEENAIMGGAGAAVSEFLARDNLLKPVLHLGLPDAYV
EHAKPAQMLAECGLDVAGIEASVTERMQLLGL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcccacgacgttccatgagattccccgcaagcgcccgaccacgcccctgctcgaccgt
gccgacacgccggccggcctgcgccggttaggtgaagccgagctggaaaccctggccgat
gaactgcgccaggagttgctctattcggtcggccagaccggcgggcacttcggtgccggc
ctcggcgtgatcgaactgaccatcgcgttgcactacgtcttcgacaccccggacgaccgg
ctggtgtgggacgtgggtcatcaggcgtatccgcacaagatcctcaccggtcgccgcgag
cgcatgcgcagcctgcgccagaaagacggcctggccgctttcccgcgccgttcggagagc
gagtacgacacctttggcgtcggtcactccagcacctccatcagcgccgcgttgggcatg
gccatcgccgcccgcctgcagaacagtgatcgcaaggccatcgcggtgatcggcgacggg
gccctgaccgccggcatggccttcgaggcgttgaaccacgcgccggaagtcgacgccaac
atgctggtaatcctcaacgacaacgacatgtcgatctcgcgcaatgtcggcggcctgtcc
aactacctggccaagattctctccagccgcacctacgcgagcatgcgcgaaggcagcaag
aaagtgctgtcgcgcctgcccggcgcctgggaaatcgcccgtcgtaccgaagaatacgcc
aagggcatgctggtgcccggcaccctgttcgaagagctgggctggaactacatcggcccg
atcgacggccatgacctgccgaccctgatcgccaccctgcgcaacatgcgcgacctcaag
ggcccgcagttcctgcacgtggtgaccaagaagggcaagggcttcgccccggcggaagtc
gatcctatcggttaccacgcgatcaccaagctcgaacccctggacgccccggccgccgcg
ccgaagaaggccagcggaccgaaatactccggcgtgttcggcgaatggctgtgcgatatg
gccgccgccgacccgcgcctggtgggcattaccccggcgatgaaggaaggctcggacctc
gtggccttcagcgagcgtttcccgctgcgctacttcgacgtggccattgccgagcaacac
gcggtgaccttcgccgccggcatggcctgcgaaggcgccaagccggtggtggcgatctac
tccaccttcctgcaacgcggttacgaccagttggtgcatgacgtcgcagtgcagaacctc
gacgtgctgttcgccatcgaccgcgcgggcctggtgggcgaagacggcccgacccacgcc
ggcagtttcgacctgtcgtacctgcgctgcattcccggcatgctggtgatgaccccgagc
gacgagaacgaactgcgcaagatgctgaccaccggccacctgtacaacggcccggcggcg
gtgcgttacccacgtggtaccgggccgaatgcgcccatcgagaaggacctggaaccgatc
gagatcggcaagggcgtggttcgccgtcggggcagcaaagtggcgctgctggtgtttggc
gtgcaattgaccgaagcgctgatcgtcgccgagaagctcgacgcgaccgtggtcgacatg
cgtttcgtcaaaccactggatgaagccctggtacgcgagattgccggcagccatgagttg
ctggtgaccatcgaggaaaacgccatcatgggcggcgccggggcagcggtcagcgagttc
ctggcgcgtgacaacctgctcaagccggtgctgcacctgggcttgccggatgcctacgtc
gaacacgcgaaaccggcgcagatgctggcggagtgcgggttggatgtggcggggatcgaa
gcgtcggtgaccgagcggatgcaactgctggggctgtga
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