Pseudomonas batumici: NUH87_21145
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Entry
NUH87_21145 CDS
T10437
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pbam Pseudomonas batumici
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbam03016
]
NUH87_21145 (miaB)
Enzymes [BR:
pbam01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
NUH87_21145 (miaB)
Transfer RNA biogenesis [BR:
pbam03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
NUH87_21145 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
LuxC
Motif
Other DBs
NCBI-ProteinID:
WVV60721
LinkDB
All DBs
Position
complement(4639304..4640632)
Genome browser
AA seq
442 aa
AA seq
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MAKKLYIETHGCQMNEYDSSRMVDLLGEHQALEVTARAEDADVILLNTCSIRERAQDRVY
SQLGRWRELKLANPQMVIAVGGCVASQEGAAIRDRAPYVDVVFGPQTLHRLPEMIDAART
TQQPQVDVSFPEIEKFDHLPEPRIDGPSAYVSVMEGCSKYCTFCVVPYTRGEEVSRPFDD
VIGEIIHLAENGVREVTLLGQNVNGYRGATHDGRLADLAELIRVVAAVDGIERIRYTTSH
PLEFSDSLIQAHAEVPQLVKHLHLPVQSGSDRILAAMKRNHTALEYKSKLRKLRAAVPGI
CISSDFIVGFPGETEKDFQQTMKLIEDVGFDFSYSFVYSQRPGTPAADLPDDTPEAVKKE
RLNALQHRLNQQGFEISRQMVGTLQRILVTDYSKKDPGELQGRTENNRIVNFRCDNPQLI
GQFIDVHIDAAQPHSLRGSMPQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagctttacatcgaaacccacggttgccagatgaacgagtatgacagctcg
cgcatggtcgacctgctgggcgaacaccaggccctggaagtcaccgcccgtgccgaagac
gcggacgtcatcctgctcaacacctgctcgatccgcgagcgcgcccaggaccgggtctac
tcccagttgggccgctggcgcgaactgaaactggcgaacccgcagatggtgatcgccgtc
ggcggttgcgtcgccagccaggaaggcgcggcgatccgcgatcgcgccccctatgtcgac
gtagtcttcggcccgcagaccctgcaccgcctgccggaaatgatcgacgccgcccgaacc
acccagcagccgcaggtggacgtgtcgttcccggaaatcgaaaagttcgaccacctgccg
gaaccgcgcatcgacggcccgagcgcctatgtctcggtgatggaaggctgcagcaagtac
tgcaccttctgcgtcgtgccctatacccgcggcgaagaagtcagccgaccgttcgacgac
gtgatcggcgagatcatccacctggccgaaaacggtgtgcgcgaagtgaccctgctgggg
cagaacgtcaacggttatcgcggcgccacccatgacgggcgcctggcggacctggcggaa
ctgatccgcgtggtcgccgccgtcgacggtatcgagcggatccgctacaccacctcgcac
ccgctggagttctccgacagcctgatccaggcccacgccgaggtgccgcagctggtcaag
cacctgcacctgccggtacagtcgggctcggaccggatcctcgcggcgatgaagcgcaac
cacacggcactggaatacaagtccaagctgcgcaagttgcgcgccgccgtgccgggcatc
tgcatcagttcggactttatcgtcggcttccccggggaaaccgagaaagacttccagcag
accatgaagctgatcgaagacgtcggtttcgacttctcctactccttcgtctacagccag
cgccccgggaccccggcggcggatttgccggacgacaccccggaagcggtgaagaaagag
cgcctcaacgccctgcaacatcgcctgaaccagcaaggattcgagatcagccgacaaatg
gtcggtacgctccagcgcatcctggtgaccgattattcgaaaaaagaccctggcgagttg
caggggcgcaccgagaataatcgtatcgtcaacttccgctgcgacaatccccagttgatc
ggccagtttatcgacgtgcacatcgacgcggcgcaaccgcattcactgcgcggctcgatg
ccgcaatga
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