Pseudomonas batumici: NUH87_21415
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Entry
NUH87_21415 CDS
T10437
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pbam Pseudomonas batumici
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbam03400
]
NUH87_21415 (radA)
DNA repair and recombination proteins [BR:
pbam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NUH87_21415 (radA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_16
AAA_22
GvpD_P-loop
AAA
SLFN-g3_helicase
RecA
nSTAND3
AAA_24
Rad51
AAA_14
NTPase_1
DUF7125
MCM
ABC_tran
DUF7129
Motif
Other DBs
NCBI-ProteinID:
WVV60773
LinkDB
All DBs
Position
4696340..4697710
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AA seq
456 aa
AA seq
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MAKAKRMYGCTECGATFPKWAGQCGECGAWNTLTETLVESGGASAPGGRTGWAGQQAQIK
TLAEVSVEEIPRFPTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIAARMP
ALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIETIIATARVEKPKVMVIDSIQTIFT
EQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAINELGVFGMTDRGLKEVSNPSAIFLTRAQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHLSNPRRVTLGLDPNRLAMLLAVLHRHGGIPTHDQDVFLNVVG
GVKVLETASDLALLAAIMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEAPPGLVIIAVTRLEQALDALFES
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaagcgcatgtacggctgcaccgagtgcggcgcgacctttcccaagtgg
gccgggcagtgcggcgagtgcggggcctggaacaccctgaccgaaaccctggtggaaagc
ggcggggcttcggcgcccggcggtcgcaccggctgggccgggcaacaggcgcagatcaag
accctggccgaagtcagcgtcgaggaaattccgcgttttcctaccgcctccggggaactc
gaccgggtgctcggcggtggcctggtggacggctcggtggtgctgatcggtggcgatccg
ggcatcggcaagtcgaccattctcctgcagaccctgtgcaacatcgccgcgcgcatgccg
gcgctctatgtcaccggcgaagaatcgcaacagcaggtcgccatgcgcgcccggcgcctg
ggcctgccccaggaccaactgcgggtgatgaccgagacctgcatcgaaaccatcattgcc
accgcccgggtggaaaagcccaaggtcatggtgatcgactcgatccagaccatcttcacc
gaacaactgcaatcggcgccgggcggcgtgtcccaggtgcgcgagagcgcggcgttgctg
gtgcgctatgcgaaacagagcggcacggcgatcttcctggtcggtcatgtgaccaaggag
ggcgccctggccggcccgcgggtgctcgagcatatggtcgacactgtgttgtatttcgag
ggcgagtccgatggtcgcctgcgcctgttgcgcgcggtgaagaaccgtttcggggcgatc
aatgagctgggcgtgttcggcatgaccgaccgcggcttgaaggaagtctccaatccctcg
gcgattttcctcacccgggcccaggaagaagtgccgggcagcgtggtcatggccacctgg
gaaggcacccggccgatgctggtggaggtgcaggccctggtggacgacagccacctgtcc
aacccgcgccgggtcaccctcgggctcgacccgaatcgcctggcgatgctgctggcggtc
ctgcaccgccatggcgggattccgacccacgaccaggatgtgttcctcaacgtcgtgggt
ggggtgaaagtcctggaaaccgcctcggacctggcgttgctggcggcgatcatgtccagc
ctgcgcaaccggcccttgccccatgacctgctggtgttcggcgaggtcggcttgtccggg
gaagtgcgaccggtgcccagcggccaggagcgcctcaaggaggcggccaagcacggtttc
aaacgggccatcgtgcccaagggcaatgcgccgaaagaagcaccgccggggctggtgatc
atcgcggtgacgcggttggagcaggcgctggatgcattgttcgaatcatag
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