Pseudomonas batumici: NUH87_21625
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Entry
NUH87_21625 CDS
T10437
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pbam Pseudomonas batumici
Pathway
pbam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NUH87_21625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pbam02022
]
NUH87_21625
02035 Bacterial motility proteins [BR:
pbam02035
]
NUH87_21625
Two-component system [BR:
pbam02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
NUH87_21625
Bacterial motility proteins [BR:
pbam02035
]
Pilus system
Twitching motility proteins
NUH87_21625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
HTH_30
VpsR
AAA_16
Mg_chelatase
AAA_22
Pre_tape_measure
AAA_19
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WVV60810
LinkDB
All DBs
Position
complement(4741047..4742390)
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AA seq
447 aa
AA seq
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MSPRQKILIVDDEPDIRELLEITLGRMKLDTSSARNVAQAREKLAQESFDLCLTDMRLPD
GTGLELVQHIQQRHPQVPVAMITAYGSLDTAINALKSGAFDFLTKPVDLARLRELVSSAL
RLPTSGSKQPSIDSRLLGDSLPMRALRKQIDKLARSQAPVYISGESGSGKELVARLIHEQ
GPRAERPFVPVNCGAIPAELMESEFFGHRKGSFTGAVEDKPGLFQAANGGTLFLDEVADL
PLAMQVKLLRAIQEKAVRSVGGQQEEIVDVRILCATHKDLNAEVGAGRFRQDLYYRLNVI
ELRVPSLRERRDDIEPLATHVLERLASGSGLPAARLHPQALDTLKGYRFPGNVRELENML
ERAYTLCENEQIEAGDLRLAEGGGSCAPVGEPSLAQIDNLEDYLESIERKLILQALEETR
WNRTAAAQRLNLSFRSMRYRLKKLGLD
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagcccacggcaaaagatcctgatcgtcgacgatgagccggatatccgcgaactcctg
gaaatcaccctgggccggatgaaactcgacaccagcagtgcccgcaacgtggcgcaggcc
cgggaaaagctggcccaggaaagtttcgacctgtgcctgaccgacatgcgcctgccggac
ggtaccgggcttgagctggtgcagcatatccagcaacgccatccccaggtgcccgtggcg
atgatcaccgcctatggcagcctcgacaccgccatcaacgccctgaaatccggggccttc
gacttcctgaccaaaccggtggacctggcgcgcctgcgcgaactggtgagcagcgccttg
cgcttgccgaccagcggtagcaagcagccctccatcgacagccggctgctgggtgactca
ctgcccatgcgcgccctacgcaaacagatcgacaaactggcccgcagccaggcgccggtg
tacatcagcggcgaatcgggcagcggcaaggaactggtggcacggctgatccatgagcag
gggccgcgcgccgagcggccgttcgtaccggtgaactgcggagccattccggccgaactg
atggaaagcgagttcttcggccatcgcaaaggcagctttaccggcgcggtggaagacaag
ccggggttgttccaggcggccaatggcggcaccttgtttctcgatgaagtcgccgacctg
ccgctggcgatgcaagtcaagctgttgcgcgccattcaggaaaaggccgtgcgcagtgtc
ggcgggcagcaggaggaaatcgtcgatgtgcgcatcctctgcgccacccacaaggatctg
aacgccgaagtcggtgccgggcgttttcgccaggacctctactatcgcctgaacgtcatc
gagctgcgggtgccatcgttgcgcgagcgccgcgacgatatcgaacccctggccacccac
gttctcgaacgactggcctccggcagcggcctaccggcggcgcggcttcatccgcaggcg
ctggatacgctcaagggctaccgcttccccggtaacgtccgggaattggagaacatgctc
gaacgggcgtacaccctgtgtgaaaacgaacagatcgaagccggcgacctgcgcctggcc
gaaggtggtgggagctgcgcgcctgtcggggaaccgagcctggcgcagatcgacaacctg
gaagattacctggagagcatcgagcgcaaactcattctccaggcactggaggaaacccgc
tggaaccgcacggcggcggcccagcggttgaacctgtcgtttcgttcgatgcgctatcgg
ctcaagaagctcgggctggattga
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