Pseudomonas batumici: NUH87_21755
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Entry
NUH87_21755 CDS
T10437
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pbam Pseudomonas batumici
Pathway
pbam03410
Base excision repair
Brite
Enzymes [BR:
pbam01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NUH87_21755
Transcription factors [BR:
pbam03000
]
Prokaryotic type
Helix-turn-helix
AraC family
NUH87_21755
DNA repair and recombination proteins [BR:
pbam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NUH87_21755
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WVV60831
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Position
4764327..4765823
Genome browser
AA seq
498 aa
AA seq
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MNTTLASSFPSAEICEKARLSRDARFDGVFFTAVLSTRIYCRPVCPARPPKVENVQYYPS
AAAAEALGFRPCLRCRPELAPGNNIWLHGEHLVARGLKLIHEGFLAEQSLDDLAARLDVG
ARQLRRLFVRHLGAPPIAVHATQRLLFAKQLLTETALPITEVALASGFQSLRRFNSAFAE
ANHAPPREFRRKPLANANNALVLRLGYRPPYDFKALLAFLGSRALPGIEVVDEHGYKRVF
GNHESPSWLQVSAWPNGAHALKLELFNVPPGQMLPVVTRIRRMFDLDADPQAIVATLGAS
PVLAPLVERYPGQRLPGGWDGFEISVRAVLGQQVSVAAARTLASRLLSRFGTVLEAPPAP
GLDRLFPAPEQLVEADLGSIGVIRTRTATIQGIARALLDGRVSFRTEQRLDDFVKSWVAL
PGIGEWTAHYIAMRALNHPDAFPAADLILRREVVRDVPPLSTKALEVLAEDWRPWRAYTV
MYLWRGASEAESIRRSQK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgacccttgcttcctcattcccctccgccgagatctgcgaaaaggctcgcctg
agccgcgatgcgcgcttcgatggagtgtttttcaccgccgttctcagcactcggatctat
tgccgtcccgtctgcccggcgcgcccgcccaaggtcgagaatgtgcagtactaccccagt
gctgccgccgccgaggcactgggctttcggccctgcctgcgttgccgtcccgaactggcg
ccgggtaacaatatctggctgcatggcgaacatctggtggcccgtgggctgaagctgatc
cacgaaggttttctcgccgaacagtccctcgacgacctggccgcccgactcgatgtcggc
gcccggcaattgcggcgcctgttcgtcaggcacctcggcgcaccgcccattgcggtccat
gccacccagcgcttgttgttcgccaagcaactgctgaccgaaaccgcgctgccgatcacc
gaagtggcactggcctcgggcttccagagcctgcgccgcttcaactcggcctttgccgag
gccaaccatgcgccgccccgggagtttcgtcgcaagccgctggccaatgccaacaatgcc
ctggtcctgcgcctgggctatcggccaccctacgatttcaaggcactgctggctttcctc
ggcagcagggcattgccgggcatcgaggtggtcgacgagcacggctacaaacgagtcttc
ggcaaccatgagtcgcccagttggctgcaggtcagcgcttggccgaatggcgcccatgcc
ctgaagctggagctgttcaatgtcccacccggccagatgctgccggtggtcacgcggatt
cgccggatgttcgacctggacgccgacccgcaggccatcgtcgccaccctgggcgccagc
ccggtgctcgcgccgctggtcgaacgctatcccgggcagcgcctgcccggcggctgggac
ggtttcgagatttcggtacgggcggtgctggggcagcaggtcagtgtggcggctgcccga
accctggcgtcgcgactgttgagccgtttcggcactgtccttgaagcgccgccggctccc
ggtctggatcggctgtttccggcacctgaacaattggtcgaagcagacttgggctccatc
ggtgtgatcaggacgcgcaccgccaccatccaggggatcgcccgggccttgctggacggt
cgggtgagttttcggacagaacaacgtctcgatgatttcgtcaaaagctgggtcgcgctg
ccgggcattggcgaatggaccgcacactacatcgccatgcgcgcgctcaatcatcccgac
gccttcccggcggcggacctgattctgcgtcgtgaggtggtcagggatgtgccgcccttg
agtaccaaggccctggaagtgctcgccgaagactggcggccgtggcgcgcctatacggtg
atgtacctgtggcgtggggcgagcgaggcagaatcgatacgcaggagtcaaaaatga
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