Pseudomonas batumici: NUH87_22240
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Entry
NUH87_22240 CDS
T10437
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pbam Pseudomonas batumici
Pathway
pbam00470
D-Amino acid metabolism
pbam00550
Peptidoglycan biosynthesis
pbam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NUH87_22240 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NUH87_22240 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbam01011
]
NUH87_22240 (murD)
Enzymes [BR:
pbam01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NUH87_22240 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pbam01011
]
Precursor biosynthesis
Amino acid ligase
NUH87_22240 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
WVV60920
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Position
4880805..4882151
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AA seq
448 aa
AA seq
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MSLIASDHFRIIVGLGKSGMSLVRFLASRGVAFAVADTRDNPPELATLRRDYPQVEVRCG
ELDVEFLCRADELYVSPGLALATPALQAAAARGVKLSGDIELFARNAKAPIVAISGSNAK
STVTTLVGEMAAAAGKRVAVGGNLGTPALDLLSDDVELYVMELSSFQLETTDHLGAEVAT
VLNVSEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALSRPLMSEGLPCWTFGLGKPD
FKAFGLREENGEKYLAFEFQNLMPVSELRIRGAHNQANALAALALGHAVGLPFDAMLSSL
RTFAGLEHRCQWVRELKGVNYYNDSKATNVGAALAAIEGLGADIAGKLVLIAGGDGKGAD
FAGLRGPVAANCRAVVLLGRDAERLAEALGDSVPLIRVQTLEEAVQRCAELAESGDAVLL
SPACASLDMFKNYEERGRLFAQAVEGLA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgctgatcgcttctgaccatttccgcatcattgtcggcctcggcaagagcggcatg
tccctggttcgcttcctggcgagccggggcgttgcctttgcggtggccgatacgcgggac
aacccgccggagctggccacgctgcgccgtgactacccgcaggtggaagtgcgttgtggc
gagctggacgtggaattcctctgccgtgccgacgagctctacgtgagccccggcctggcc
ctggcgaccccggccctgcaggccgcggccgcccgtggggtgaaattgtccggcgacatc
gagctgtttgcgcgtaacgcgaaggcgccgattgtcgccatcagcggctccaatgcgaaa
agcaccgtcaccaccctggtgggcgagatggcggcggcggccggcaagcgggtcgcggtc
ggcggcaacctcggtaccccggcgctggacctgctcagcgacgacgtcgagctgtacgtg
atggagctgtcgagcttccagctggagaccacggaccacctcggtgccgaagtggctacc
gtgctcaatgtcagcgaagaccatatggaccgctacagcggcctgccggcctatcacctg
gccaagcaccggatcttccgtggggccaggcaggtggtggtcaaccgccaggacgcgctg
tcccggccgctgatgagcgaaggcctgccgtgctggaccttcggcctgggcaaaccggac
ttcaaggccttcggcctgcgcgaagagaacggcgagaagtacctggccttcgaattccag
aacctgatgccggtgagcgagctgcgtattcgcggcgcccacaaccaggccaatgccctg
gcggccctggccctgggccatgcggtcgggctgccgttcgatgccatgttgtcgagcctg
cgcacgttcgccggccttgaacatcgctgccaatgggtgcgcgagttgaagggcgtgaat
tactacaacgactccaaggccaccaacgtcggtgcggccctggccgccatcgaaggcctg
ggggccgacattgccggcaaactggtgctgatcgccggtggcgacggcaagggcgcggat
ttcgccggcctgcgcggcccggtcgcggccaactgccgggcggtggtgctgctcggtcgg
gatgccgagcgcctggccgaggccttgggtgacagtgtgccgctgatccgtgtgcagacc
cttgaagaggcggtgcaacgttgtgccgaactggccgagtcgggtgacgctgtgttgctg
tcgccggcctgcgcgagcctggacatgttcaagaattacgaagaacgcgggcgcctgttc
gcccaggcagtggaggggttggcgtga
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