Pseudomonas batumici: NUH87_22730
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Entry
NUH87_22730 CDS
T10437
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
pbam Pseudomonas batumici
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbam03009
]
NUH87_22730 (der)
Ribosome biogenesis [BR:
pbam03009
]
Prokaryotic type
GTPases
NUH87_22730 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
AAA_22
ABC_tran
Ras
DUF5906
AAA_24
NTPase_1
AAA_18
NOG1
SRPRB
cobW
Nuc_deoxyri_tr2
AAA_14
RHD3_GTPase
Motif
Other DBs
NCBI-ProteinID:
WVV61008
LinkDB
All DBs
Position
4988514..4989989
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AA seq
491 aa
AA seq
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MVPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRTYILIDTGGI
SGDEHGMDEKMAEQSLLAIEEADVVLFLVDAKAGFTAADQMIGEHLRKRNKRSYVVANKV
DNIDPDMARAEFSPMGLGDAIPIAGAHGRGITQMLEIALSDFPKDDEEAPEDGEAEDVAE
GEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDQPGTTRDSIYIPFER
NEEKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVDHDLNLLG
FALESGRALVIALNKWDGMTPGERDFVKVELERRLFFVDFADIHFISALHGTGVGNLYQS
VQNSFKSAVTRWPTSRLTQILEDAVSEHAPPMVNSRRIKLRYAHLGGANPPLIVIHGNQV
EKVPKSYVRYLENTYRRVLKLVGTPIRIEFKGGENPYEGNKTALTDRQVNKKRRMMSHHK
KADKKRRDKKR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggttcccgtaatcgccctggtgggccgaccgaacgtcggtaaatccaccttgttcaac
cgcctgaccaggacccgtgacgccattgtcggcgacttgtccggtctgacccgtgatcgc
caatacggtgaggcaaagtggcaagggcgcacctatatcctgatcgacaccggcggtatt
tccggcgacgagcatggcatggacgaaaagatggccgagcagtcgctgctggccattgaa
gaagccgatgtcgtgctgttcctggtagatgccaaggccggtttcactgccgctgaccag
atgatcggcgagcacctgcgcaaacgtaacaagcgctcctacgtggttgccaacaaggtc
gacaacatcgacccggacatggcccgcgccgaattcagcccgatgggcctgggcgacgcg
atcccgatcgccggcgcccacggtcgcggtatcacccagatgctggaaatcgccctgagc
gacttcccgaaggacgacgaggaagcaccggaagacggtgaagccgaagacgtcgccgaa
ggtgaagaagccaagcgcattcccggaccgagcgagaaggatggcatcaagatcgccatc
atcggtcgtccgaacgtcggcaagtcgacactggttaaccgcatgctcggtgaagaccgg
gtgatcgtctatgaccagcccggcaccacccgcgacagtatctacatcccgttcgagcgc
aacgaggaaaagtacacgctgatcgacaccgccggtgtgcgcaagcgcggcaagatccac
gaggaagtcgaaaagttctccgtggtgaaaaccctgcaggcgatcaaggacgccaacgtg
gtgatcttcgtcatggacgcccgcgaaggggtggtcgaccacgacctcaacctgctcggg
tttgccctggagtccggtcgcgcactggtgatcgcgctgaacaaatgggacggcatgacc
ccgggcgagcgtgatttcgtcaaggtcgagctggagcgccggttgttcttcgtcgacttc
gccgacatccacttcatctcggccttgcacggcacgggcgtgggcaacctgtaccagtcg
gtgcagaactccttcaagtcggcggtgacccgctggccgaccagccgcctgacccagatc
ctcgaagatgcggtgagcgagcacgcgccgccgatggtcaacagccgtcggatcaagctg
cgctatgcgcacctgggtggggccaacccgccgctgatcgtgatccacggcaaccaggtg
gagaaggtgccgaagtcgtatgtccgctacctggaaaacacctaccgccgcgtgctgaag
ctggtgggtacgccgatccgcatcgagttcaagggcggcgagaacccgtacgaaggcaac
aagaccgcgctgaccgaccgccaggtcaacaagaagcgccggatgatgtcgcaccacaag
aaggccgacaaaaagcgtcgcgacaagaaacgctga
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