Pseudomonas batumici: NUH87_22825
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Entry
NUH87_22825 CDS
T10437
Symbol
treR
Name
(GenBank) trehalose operon repressor
KO
K03486
GntR family transcriptional regulator, trehalose operon transcriptional repressor
Organism
pbam Pseudomonas batumici
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbam03000
]
NUH87_22825 (treR)
Transcription factors [BR:
pbam03000
]
Prokaryotic type
Helix-turn-helix
GntR family
NUH87_22825 (treR)
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Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_41
HTH_DeoR
Rrf2
MksE
HTH_11
DIP2311-like_C
FmdA_AmdA
TrmB
Motif
Other DBs
NCBI-ProteinID:
WVV61027
LinkDB
All DBs
Position
complement(5010168..5010872)
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AA seq
234 aa
AA seq
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MSKYNQIYSDLLASITTEQLEKGARLPSETELMDSYQASRGTVRKAIEQLQERGFAQKIH
GKGTFVLSRSPIEFQLGGIVSFQEAHSSLGSNIGTEVVEFSEIALEGPLLERLNAEPGSP
VIRIKRVRRIDGKRIILDINYFVAELIPGLTRDIAEHSIYAYIEQTLQLSISFAQRTIQA
ARCSRDDQQHLDLDGASHVIVVKNQTFLQDGRQFEYTESRHTLDKFYFSDVARR
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatacaaccagatctacagtgatctgcttgccagcattaccaccgagcaattg
gaaaaaggcgcccgactgccgtcggaaaccgaactgatggacagctaccaggccagccgg
ggcaccgtgcgcaaggccatcgagcaattgcaggagcgcggtttcgcccagaagatccat
ggcaagggcaccttcgtgctgtcacgcagcccgatcgagttccagttgggcggtatcgtc
agcttccaggaggcgcactccagccttggcagcaacatcggcaccgaagtggtggagttc
agcgagatagcccttgaaggcccgctcctggagcgcctgaatgccgaaccgggcagcccg
gtaatccgcatcaagcgggtgcggcgcatcgacggcaagcggatcatcctcgacatcaac
tatttcgtcgccgagctgatccccggcctgacccgggacatcgccgaacactcgatctac
gcctatatcgaacagaccctgcaactgagcatcagcttcgcccagcgcaccatccaggca
gcccgttgcagccgggacgaccagcagcatctggacctggatggcgcaagccatgtgatc
gtggtgaagaaccagacgttcctgcaggatggccggcagttcgaatacaccgagtcgcgg
cacaccctggacaagttctacttttcggatgtggcccggcgctga
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