Pseudomonas batumici: NUH87_23700
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Entry
NUH87_23700 CDS
T10437
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pbam Pseudomonas batumici
Pathway
pbam00061
Fatty acid biosynthesis
pbam00071
Fatty acid degradation
pbam01100
Metabolic pathways
pbam01212
Fatty acid metabolism
pbam02024
Quorum sensing
pbam04146
Peroxisome
Module
pbam_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NUH87_23700 (fadD1)
00071 Fatty acid degradation
NUH87_23700 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NUH87_23700 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
NUH87_23700 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pbam01004
]
NUH87_23700 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbam04147
]
NUH87_23700 (fadD1)
Enzymes [BR:
pbam01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NUH87_23700 (fadD1)
Lipid biosynthesis proteins [BR:
pbam01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NUH87_23700 (fadD1)
Exosome [BR:
pbam04147
]
Exosomal proteins
Exosomal proteins of breast milk
NUH87_23700 (fadD1)
Exosomal proteins of breast cancer cells
NUH87_23700 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
WVV61192
LinkDB
All DBs
Position
5212904..5214601
Genome browser
AA seq
565 aa
AA seq
DB search
MIEDFWKDKYPAGIAAEINPDEYPNVQTVLKQSCQRFASKPAFSNLGKTLTYGELYELSG
AFAAYLQQNTDLQPGDRIAVQLPNVLQYPVAVFGAIRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEAVVPKTGVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYH
LPKAVKFNDVLSKGRGQPVKEANPSSGDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCR
ALMGSNLNEGGEIVITPLPLYHIYAFTFHCMAMMLSGNHNILISNPRDLPAMVKELSKWK
FSAFVGLNTLFVALCNNEAFRKLDFSGLKVTLSGGMALQLAASERWKAVTGCSICEGYGM
TETSPVASVNPSQNIQAGTIGIPVPSTLCKVVNDAGEEQALGEIGELCVKGPQVMKGYWQ
RQDATDEILDSEGWLKTGDIAVIQPDGYMRIVDRKKDMILVSGFNVYPNELEDVLATLPG
VLQCAAIGVPDEKSGEVIKIFIVAKPGVTLTKDQVMEHMRANVTGYKVPRYVEFRDALPT
TNVGKILRRELRDAELKKLGLKKTA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagacttttggaaggataagtacccggctgggattgctgccgagatcaatcct
gacgagtacccgaatgttcagacggtattgaaacagtcttgccaacgattcgccagcaag
ccggccttcagcaacctcggcaagacactcacctacggtgagctgtacgaactgtcgggt
gcttttgccgcttacctgcaacagaacaccgacctgcagccgggcgatcgcatcgccgtg
cagttgcccaacgtgctgcaatatcccgtcgccgtattcggtgccattcgcgccgggctg
atcgtggtcaacaccaacccgctgtacaccgcgcgggaaatggaacaccagttcaacgac
tccggcgccaaggccctggtgtgcctggcgaacatggcgcacctggccgaggccgtggtg
cccaagaccggcgtcaagcacgtgatcgtcaccgaagtcgccgacctgttgccgccgctc
aagcgcctgctgatcaacagtgtcatcaagtacgtgaagaaaatggtcccggcctatcac
ctgcccaaggccgtcaagttcaacgacgtgctgagcaagggccgtggccagccggtcaag
gaagccaatccgtccagcggcgacgtcgccgtgctgcaatacaccggcggcaccacgggc
gtggccaagggcgcgatgctgacccaccgcaacctggtggcgaacatgctgcagtgcagg
gcgctgatgggctcgaacctcaatgaaggtggcgagatcgtcatcaccccgctgccgctg
taccacatctatgccttcacctttcattgcatggcgatgatgctgagcggcaaccacaac
atcctgatcagcaacccgcgtgacctgccggcgatggtcaaggagctgtcgaagtggaag
ttcagcgcctttgtcggcctgaacacgctgttcgtggcgctgtgcaacaacgaggccttc
cgcaagctggacttctccgggctcaaggtcaccttgtccggcggcatggccctgcaactg
gcggcgtccgaacgctggaaggcggtgaccggctgttcgatctgcgaaggctacgggatg
actgaaaccagcccggtggcttcggtgaacccgagccagaacatccaggccggcacgatc
ggcattccggtgccctcgaccctgtgcaaggtggtcaacgatgccggggaagaacaggcc
ctgggcgaaatcggcgagctgtgcgtcaagggcccgcaggtgatgaagggctactggcag
cgccaggacgccaccgacgagatcctcgacagcgaaggctggttgaagaccggcgatatc
gcggtgatccagccggacggctacatgcgtattgtcgaccgcaagaaggacatgatcctg
gtgtcgggcttcaacgtttatccgaacgagctggaagacgtgctggcgaccttgcccggc
gtgctgcaatgcgcggccatcggcgtgccggacgagaagtccggggaggtcatcaagatc
ttcatcgtggccaagccgggcgtgaccctgaccaaggaccaggtgatggagcacatgcgc
gccaatgtcaccggctacaaggtgcccaggtacgtcgagttccgcgatgcgctgccgacc
accaacgtcggcaagatcctgcgccgcgagctgcgcgatgccgagctcaagaagctgggc
ctgaaaaagacggcctga
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