Pseudomonas batumici: NUH87_25245
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Entry
NUH87_25245 CDS
T10437
Symbol
prpF
Name
(GenBank) 2-methylaconitate cis-trans isomerase PrpF
KO
K09788
2-methylaconitate isomerase [EC:5.3.3.-]
Organism
pbam Pseudomonas batumici
Pathway
pbam00640
Propanoate metabolism
pbam01100
Metabolic pathways
pbam01120
Microbial metabolism in diverse environments
pbam01200
Carbon metabolism
Module
pbam_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NUH87_25245 (prpF)
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Gene cluster
GFIT
Motif
Pfam:
PrpF
Motif
Other DBs
NCBI-ProteinID:
WVV61469
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Position
5524816..5526000
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AA seq
394 aa
AA seq
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MAHAAQIRIPATYMRGGTSKGVFFNLSDLPEAAQLPGAARDALLLRVIGSPDPYEKQIDG
MGGATSSTSKTVILSKSIKADHDVDYLFGQVSIDKPFIDWSGNCGNLSAAVGSFAISAGL
VAAERIPRNGVAVVRIWQVNIGKTIIAHVPITEGQVQETGDFELDGVTFPAAEVQLEFMD
PAAEEEGAGGSMFPTGNLVDDLEVPGVGTFKATMINAGIPTIFVNAADIGYTGTELQGDI
NGDPKALAMFETIRAYGAVRMGLIQRIDEAATRQHTPKVAFVAAPASYTASSGKPVAGAD
LDLLVRALSMGKLHHAMMGTAAVAIGTAAAIPGTLVNLAAGGGARSAVRFGHPSGALRVG
AEATQVDGEWTVVKAIMSRSARVLMEGWVRVPGE
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggctcatgcagcgcaaatcaggattcccgccacctacatgcgtggtggtaccagcaaa
ggggtgttcttcaacctcagcgacctgcccgaagcggcacagctgcccggcgcggcgcgg
gacgcattgttgttacgggtgatcggcagccccgatccctatgaaaagcagatcgacggc
atgggcggggcgacctccagcaccagcaagacggtgatcctgtccaagagcatcaaggcc
gatcacgatgtcgattacctgttcggccaggtctccatcgacaagccgtttatcgactgg
agcggcaactgcggcaacctgtcggcggcggtcggatcgttcgccatcagtgccggcctg
gtggctgccgagcggattccgcgcaatggtgtggcggtggtgcggatctggcaggtgaat
atcggcaagaccatcattgcccatgtgccgatcaccgagggccaggtgcaggaaaccggt
gacttcgaactcgacggcgtgacctttccggcggctgaagtacagcttgagttcatggat
ccggcggccgaggaggagggcgcgggcggttcgatgttccccaccggcaacctggtggac
gacctggaagtgccgggggtgggtaccttcaaggcgacgatgatcaatgccgggattccg
acgatcttcgtcaacgcggcggatatcggctataccggtaccgagttgcaaggcgatatc
aacggcgaccccaaggccctggcgatgttcgagacgatccgtgcctacggggcggtgcgc
atgggcctgatccagcgcatcgacgaggcggccacgcgccagcacacgccgaaggtggcg
ttcgtggctgcgccggccagctacaccgcgtcgagcggcaagccggtggcgggggccgat
ctggacctgctggtacgggcattgtccatgggcaagctgcaccacgcgatgatgggcacc
gcggcggtggccatcggcacggcggcggcgattcccggcacgctggtgaatctggcggcc
ggtggtggcgcgcgcagcgcggtgcgtttcgggcacccgtcgggcgccttgcgggtgggc
gccgaagccacccaggtcgatggcgaatggaccgtggtcaaggccatcatgagccgcagc
gcgcgcgtcctgatggaaggttgggtgcgcgtgccaggggagtga
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