Pseudomonas batumici: NUH87_25470
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Entry
NUH87_25470 CDS
T10437
Symbol
rluC
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pbam Pseudomonas batumici
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbam03009
]
NUH87_25470 (rluC)
Enzymes [BR:
pbam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
NUH87_25470 (rluC)
Ribosome biogenesis [BR:
pbam03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NUH87_25470 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RluD_N
Motif
Other DBs
NCBI-ProteinID:
WVV61509
LinkDB
All DBs
Position
5570116..5571072
Genome browser
AA seq
318 aa
AA seq
DB search
MTTTTPPTPGVQLLEVSPEYAGQRIDNFLLARLKGVPKTLIYRILRKGEVRVNKGRIKPE
YKLQAGDVVRVPPVRVPERDEPVPLAQGLLQRLEDSIVFEDKALIVINKPAGIAVHGGSG
LNYGVIEAFRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHEALRGDGVDKRYMA
LVRGNWATSVKQVRAPLLKSNLRSGERMVEVNEEGKEALTVFKVLRRFGDFATMVEAKPV
TGRTHQIRVHTLHAGHCIAGDSKYGDDDFTKEIRDLGGKRLFLHAYMLTVPLPDGGELKL
QAPVDEMWAKTVERLSAV
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgactacccccccgactccaggcgtacaactgcttgaggtctcgccggaatat
gccggccagcgcattgacaatttccttctcgcccggctcaagggtgtgcccaagaccttg
atttaccgcattttgcgcaaaggcgaagtgcgggtgaacaaggggcgcatcaagcccgag
tacaaactgcaggccggtgatgtcgtgcgggttccgcccgtgcgcgtccccgagcgcgac
gagccggtgcccctggcccagggcctgttgcagcgcctggaggactcgattgtcttcgaa
gacaaggcgttgatcgtgatcaacaagccggcgggcattgccgtgcacggcggcagcggc
ctgaactacggcgtgatcgaggccttccggcagttgcgcccggacgccaaggagctggag
ctggtccatcgcctggaccgcgacacctccggcctgctgatgatcgccaagaagcgcagc
atgttgcgccatctgcacgaagcgctgcgcggcgatggcgtcgacaagcgctacatggcc
ctggtgcgcggcaactgggccacctccgtcaagcaggtgcgcgcacccttgctcaagagc
aacctgcgttccggcgagcgcatggtcgaggtcaacgaagagggcaaggaggcgctcacg
gtattcaaggtgctacgccgtttcggtgatttcgcgaccatggtcgaggccaagccggtg
accggccgtacccaccagattcgcgtacacaccctgcacgccgggcattgcatcgccggt
gacagcaagtatggcgatgacgacttcaccaaggaaattcgtgacctgggtggcaagcgt
ctgtttctgcacgcctacatgctgaccgtgccgctgccggatggtggcgagttgaagttg
caggcgccggtggatgaaatgtgggccaagacggtggagcgactgagtgcggtctga
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