Pseudomonas batumici: NUH87_25680
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Entry
NUH87_25680 CDS
T10437
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
pbam Pseudomonas batumici
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
TEN_YD-shell
Collagen
DUF6443
Motif
Other DBs
NCBI-ProteinID:
WVV61551
LinkDB
All DBs
Position
complement(5611531..5616501)
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AA seq
1656 aa
AA seq
DB search
MTTLSTVHSNAFNFVHNSVDPRTGQYTLSINLPELKSHQLCGPSIPLGLDFSPLNTLDSG
FGLGWNLRLSQYTPHNQVITLSTGESFKVTSSGDEPDIKEKKLDTFHFYDEGNDRYRIVH
KSGLVEILQTGGSGDNRVALPVEIHSALGHYVELDYVPFQGGQLLSSIGEKDGPTLLQVV
RSTNEVELRLLPGQAGEALYLLHLTGGKVMAITLPGETQPAWRFHYGDSIRGMTCLRSVQ
NPTGGVETIEYRDEGHVFPSSAGRTALPRVTHHTTEPGFGQPPIKATYQYNDHLNHNFLG
NGASLSWNNDVDNLYNAPHTYLYGSTAILLVGTREVRTVKRTYNRFHLLTEEVTTQGDCR
QTVQTTYYAEDVPFERQPPQYQLPKEVKTSWNLVSNPNQYRSEIQTSAYDDFGNLTEQVD
INGVRSVHEYFDKDGIPGECPEDPEGFVRNPRHITVYPAPAAGEQAPTLRTTFRYIAIAP
LTGSKTKGYLEAREERMSQMMGDEEILLRQVVRSFNNAPEDAYLHGTLARQTDTLNGKTS
TTDYLYNPIDSELAGEPVQETLQTLTNNFDELSKTVTFHHARGSGRLVLQTDADGVANHY
RYDAQGRLISETLAPGNPEYSATRHYAYIVEGQQRGQVQTDIKGVKRKDLFDGLGRIIYT
ALLEPGSQDYRQTYAASYDAQDCLISETEYDWLADQSQAFLTLTRQYSYDDWGQQCRVRQ
ADDVVSVTERSPFGESGPRERSWLERADRPGIALSGEVLTLYNRFNKPTSITRQAIDGTP
AGVTEYQYDGLGNCLQQTERVDGQERIHHYEYDVWGRMEATRLPDGTRVERSFAEHSNTE
LPVKLKVIPGNESLPEVLVGEQAFDGLLRLTQVKTGPRIEEYRYEADQMQISQKITAANQ
TFDYTYDLALTNQPKQISTEENGVAHTATYRYDPKSARILASTNAQGERSYEYDSSGYLQ
MERWTDSTGMTQERHYVTSLQGRQKSRTSETPGAKASRLETLFDYDAQGRVKQMIQGSLQ
ADLEYNERGQLKKTTTENLQSHDRLVNEQEYDSLGRETKRTLSLTGHPPLTISQTWLADD
KLHSRHQETDGRSLLHETFAYDLRGRLEEYHCSGETLPRDRYGNAILDQLFRFDDLDNIT
RCTTTFDNGDTNVARFTYPTDPNEDPCQLLSVGNSYTSGGYPESQAFAYDANGNMLNDEQ
GRQLDYDSQGRLLAVKSANDASVLSQYRYDSHDHLVGVRQADQGEQLRFYEGYRLSHTVQ
DDRHTHYLHLDDRPLGQQQLDELQQTLLLLTDASPSVIGESLQGSLRIGTYSAYGERDSQ
QALQSLLAFNAEVCEPGNGWYLLGRGYRAYNPGLMRFHSPDTLSPFGAGGLNAYMYCLGN
PIAFSDPTGHAGYAGVRPEDPGYRPPYEQPSEKSGGWAKWLGIGIFALVLVGTVASMGYS
LAAAPSAIALVKTTGFMMTAGSILLQTGGLALQVAGELGKDDNLSLAGASLSGLGMTMAM
FGVFPMLSYVAQAKAALAGGAAVAGGAAVAGVPGPAGPPGPPGPPGPPGAPGKPGAPGAP
GAPGKPGAPGAPGAPGKPGSNTRVRDTQSVEVEFSASQPSTANNGSPPSSPGTARNKYVQ
RPGESYGAFLERSHQMRESKRIYGDSYRKHKGWGVG
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgctcagcactgtacattcaaacgcatttaacttcgtccataacagtgtcgac
ccgcgcaccggccaatatacgctgtccatcaacttgccggagctcaagagtcaccagctc
tgcggcccgagtatcccgctgggcctggacttcagcccgctcaataccctcgacagtggt
tttggcctgggctggaacctgcggttgtcgcaatacaccccgcacaaccaggtgatcacc
ctcagtaccggggaaagtttcaaggtcaccagcagcggcgacgagccggatatcaaggaa
aagaaactcgacaccttccatttctacgacgaaggcaacgaccgctaccgcatcgtgcac
aaatccggcctggtggaaatactccagaccggcggcagcggcgataaccgggtggccttg
ccggtggaaatccattcggcactgggacactatgttgaactcgactatgtgcccttccag
ggcggccagttgctctccagcatcggcgagaaggacggtccgaccttgctgcaggtcgtg
cgcagcaccaacgaggtcgagttgcgcttgcttcccgggcaagccggcgaggcgctgtac
ctgttgcatctgactggcggcaaggtcatggcgattaccctgcccggcgagacgcaaccc
gcctggcgctttcactatggcgacagcatccgcggcatgacctgcttgcgctcggtgcaa
aaccccacgggtggcgtggaaaccatcgaataccgcgatgaaggccatgtattccccagc
tccgccggccgcacggcgctaccgcgcgtcacccatcacaccaccgagccgggctttggc
cagccaccgatcaaggcgacctaccagtacaacgatcacctgaaccacaatttcctcggc
aatggcgcgtccctcagttggaacaacgatgtggacaatctctacaacgcgccccacacc
tatctctatggctcgaccgcgatcctgctggtgggcacccgcgaggtacggaccgtcaag
cgtacctataaccgctttcatctgctgaccgaggaagtcaccacccagggcgactgtcgc
cagaccgtgcagaccacctattacgccgaggatgtccccttcgagcggcaaccgccgcag
taccagttgcccaaggaggtaaaaaccagttggaacctggtcagcaaccccaaccagtat
cgcagcgaaatccagaccagcgcctatgacgactttggcaacctgaccgaacaggtcgat
atcaatggcgtccgctcggttcatgagtacttcgacaaggacgggatacccggcgaatgt
ccggaggacccggaaggttttgtccgcaacccacgccatatcacggtgtatccggccccg
gcggcaggcgagcaggcaccgaccttgcgcacgacatttcgctatatcgccatagcgcca
ctgacaggcagcaagaccaagggctatctggaagcccgcgaagagcgcatgtcacagatg
atgggtgacgaggagatcctgttgcgtcaggtggtccgcagcttcaacaacgcaccggag
gacgcctatctgcatggcaccctggcacgccagaccgacaccctcaacggcaagaccagc
accaccgactatctctacaatccgatcgacagcgagctggccggggagcccgtgcaggag
accctgcaaaccctgaccaacaacttcgatgagctgagcaagaccgtgacctttcaccat
gcgcggggcagtggccggctggtgctgcaaaccgatgccgatggtgtcgccaaccactac
cgctacgatgcccagggccggctgatcagcgaaacgctggcccccgggaatcccgagtac
agcgcaacacgccactatgcctatatcgtcgaagggcagcagcgcggccaggtgcagacc
gatatcaagggcgtcaagcgcaaggacctgttcgatggcctcggccggatcatctacacc
gcactcctggagcccggcagccaggactaccggcaaacctatgcggccagctatgacgcc
caggactgcctgatctcggaaaccgagtacgactggctggctgaccagagccaggctttt
ctcacactgacccgccagtatagctacgacgattggggccaacagtgccgggtcaggcag
gccgacgatgtggtcagcgtgaccgagcgctcgccgttcggtgagtccggaccgcgggag
cgcagttggctggaacgtgccgatcggccgggcattgcgctgagcggtgaagtcctgacc
ctctacaaccgcttcaataaaccgacttcaatcactcgccaggctatcgacggcacaccg
gcgggcgttaccgagtaccagtacgacggtctcggcaactgcctgcagcagaccgaacgg
gtggacggccaggagcgcatccaccattacgaatatgacgtctggggacgcatggaagct
acccgactgcccgacggcacccgtgtcgaacgcagctttgccgagcacagcaataccgaa
ctgccggtcaagctgaaggtgatcccgggcaacgagtcactgcccgaggtgctggtcggt
gaacaggccttcgatgggctgctgcgcctgacccaggtcaagaccggtccgcgcatcgag
gagtatcgctacgaggccgaccagatgcagatcagccagaagatcaccgcggccaaccag
accttcgattatacctacgacctggcactcaccaaccaacccaagcagatcagcaccgag
gagaacggcgtcgcgcataccgcgacctatcgctatgacccgaaaagcgcgcgcatcctc
gccagcaccaatgcccagggggaacgcagctacgagtacgacagtagcgggtacctgcag
atggaacgctggaccgacagcaccggcatgacccaggaacgccattacgtcacctccctg
caaggccggcaaaagagccgcaccagcgaaacccccggcgccaaggccagccgcctggaa
accctgttcgactatgacgcgcaaggccgggtcaagcagatgatccagggctcgctgcaa
gccgacctggagtacaacgagcgtggtcagttgaaaaaaaccaccacggaaaacctgcag
agccatgatcgcctggtcaatgagcaggaatatgacagcctgggccgggaaaccaagcgc
accctgagcctgaccgggcatccgcccctgaccatcagccagacctggctggccgatgac
aaactgcacagccgccatcaggaaaccgacggccgcagcctgctgcatgaaacctttgcc
tatgatctgcgcgggcgcctggaggagtaccactgctcgggcgagaccctgcccagggat
cgctatggcaatgccatcctcgaccaactgttccgcttcgatgacctggacaatatcacc
cgctgcaccaccaccttcgacaatggcgacaccaatgtcgcgcgtttcacctacccgacc
gacccgaacgaagatccttgccaactactcagcgtcggcaacagctataccagcggcggt
tatccggaaagccaggcgtttgcctatgacgccaatggcaatatgctcaacgacgaacag
ggccggcaactggactacgacagccaggggcgcctgctggcggtgaagagcgccaatgac
gccagcgtgctgagccagtatcgctacgacagccacgaccatctggtcggggtgcgccag
gccgaccagggcgagcagttgcgcttctacgagggttatcgcctgagtcataccgtccag
gacgaccggcatacccactacctgcatctggacgatcggcccctgggtcagcagcagctc
gacgagctccagcagaccctgctcctgctcaccgatgccagccccagcgtgatcggcgaa
agcctgcagggcagcctgcgcatcgggacctacagtgcctatggcgaacgcgacagccag
caggccctgcagagcctgctggccttcaatgccgaagtctgcgagcccggcaatggctgg
tacctgctggggcgtggctatcgggcctacaacccggggctgatgcgcttccatagcccg
gatacgctgagcccattcggtgccggtggcctcaacgcctatatgtactgcctgggcaat
ccgattgcctttagcgacccgaccggccatgccggctatgccggcgtacgcccggaagac
ccgggctatcgccccccctacgagcagccgtccgaaaaatccggtggttgggccaagtgg
ctgggaatcggcatattcgcgctggtactggtgggcaccgtcgcctcgatgggctattcc
ctggcagccgcgccctccgccattgcgctggtcaagacgaccggctttatgatgacggct
ggcagcatcctcctgcaaacgggcggcctggcgttgcaagtggcgggcgagctgggcaag
gacgacaacctgagtctcgccggcgcgtcgctgtccggactcgggatgacgatggccatg
ttcggcgtgttcccaatgttgagctacgttgcccaggcaaaagccgcgctggcaggaggc
gcagcagtagccggaggggccgcagtggctggagttccgggaccagcggggcctcccgga
cctcccggacctcccggacctcctggtgctcctggtaaacctggtgctcctggtgctcct
ggtgccccaggtaagcccggtgctcctggcgctcctggtgctcctggtaaacctggctct
aatacaagggttagagatacgcagtcggtagaagttgaattttcagcttcgcagcccagt
accgctaacaacggatccccaccaagctcacccgggactgccagaaataaatatgtccaa
cggccaggtgaatcttatggcgcatttcttgagcgtagccatcagatgcgcgaatccaaa
cggatatatggcgacagctatagaaaacacaagggctggggcgtcggctga
DBGET
integrated database retrieval system
