Pasteurellaceae bacterium NI1060: AC062_0151
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Entry
AC062_0151 CDS
T10491
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pban Pasteurellaceae bacterium NI1060
Brite
KEGG Orthology (KO) [BR:
pban00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pban03016
]
AC062_0151
Enzymes [BR:
pban01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
AC062_0151
Transfer RNA biogenesis [BR:
pban03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AC062_0151
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Gene cluster
GFIT
Motif
Pfam:
RNB
S1
OB_RNB
CSD2
TRAM
S1CSD-TOTE-2
DUF2274
Motif
Other DBs
NCBI-ProteinID:
AOF52251
UniProt:
A0A1B3JDW4
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All DBs
Position
157253..159232
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AA seq
659 aa
AA seq
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MFQDNPLLAQLKQQIHESKERVEGVVKSTDKAYGFLECDKKTYFIAPPAMKKVMHGDKIT
ATIEKQGDKEQAEPESLIEPMLTRFIAKVRFNKDKKLQVLVDHPSINQPIGAQQAKSVKE
ELQEGDWVVANLKTHPLRDDRFFYATINQFICRADDEFAPWWVTLARHEQSRYPVQGAEH
YEMLDQQTREDLTALHFVTIDSESTQDMDDALYIEPVEQNGEQIGWKLVVAIADPTAYIA
LDSQIEKDAKQRCFTNYLPGFNIPMLPRELSDELCSLMANETRPALVCYIETDLQGNITA
KPYFVSAHVQSKAKLAYNKVSDYLEQVPNAWQPETTEITEQIHRLHQFTLARINWRKTHS
LLFKEKPDYSFVLAENGKVQEIKAEHRRIANQIVEESMIIANICAAQFLNEQTKTGIFNT
HSGFDKKFLENAHHFLMANLANEENQSELNERYSTENLSTLNGYCQMRHDIEPIDGDYLE
LRLRRYLTFAEFKAELAAHFGLGLEGYATWTSPIRKYSDMVNHRLIKAVLTQQPYEKPQD
EVLARLQEARRQNRLVERDIADWLYCRYLVDKVAENAEFDAEVQDVMRGGLRVQLLENGA
SMFVPASTLHNNKEEIQVNTDELALYIKGERAYKIGDIVRVKLTEVKEATRSIVGSVVI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagacaatccattactcgcacaactcaaacaacaaattcacgaaagcaaagag
cgtgtagaaggtgtagtgaaaagcaccgacaaagcctatggttttttagaatgtgataag
aaaacctattttattgcgccacctgcgatgaaaaaagtgatgcacggcgataaaattacc
gccacaattgaaaaacaaggtgacaaagaacaagccgaaccagaatccttgatcgaacct
atgctgacccgttttattgcaaaagtgcggttcaataaagacaagaaattacaagtgttg
gtcgatcacccaagcattaatcagcctattggtgcgcaacaagccaagtctgtaaaagaa
gaattgcaagaaggcgattgggttgttgctaacctgaaaactcacccattgcgtgatgat
cgctttttctatgccacgattaaccaatttatttgccgtgcagatgatgaatttgcccct
tggtgggtcactcttgcccgtcacgaacaatcccgttatccggtacaaggtgccgagcat
tatgaaatgcttgatcaacaaacacgtgaagatttgaccgcacttcattttgttaccatt
gacagtgaaagcacacaagatatggatgatgctctctatattgagcctgttgaacaaaat
ggtgagcaaatcggttggaaattagtcgttgcgattgccgacccgacagcttatatcgcc
cttgattcacaaatcgaaaaagatgcgaagcaacgttgtttcactaattatcttcccggt
tttaatattcccatgttgccacgtgagctttccgatgaactctgctctttaatggcaaat
gaaacccgtccagccctcgtttgctatattgaaacggatttacaaggtaatatcacggca
aaaccgtattttgtttcggctcatgtacaatcaaaagccaaacttgcctataacaaagtt
tctgattatttagaacaagtacccaatgcgtggcaaccggaaaccactgaaattaccgag
caaattcatcgcctacaccaatttacattagcacggatcaactggcgtaaaacccattcg
ctattgttcaaagaaaaaccggattattcttttgtgctggctgaaaatggcaaagtgcaa
gagatcaaagcggaacaccgccgcattgcaaatcaaattgtagaagaatcaatgattatt
gcgaatatttgtgcggcacaattcttaaatgaacagacaaaaaccggtatcttcaacact
catagcggttttgataaaaaattcttggaaaacgcccatcatttcttaatggcaaatttg
gctaacgaagaaaatcaatcggaacttaatgagcgttattctacggaaaatttatcaaca
ttaaatggctattgccaaatgcgtcacgatatcgaacctattgacggcgattatctcgaa
ttacgcttgcgccgctatttaacctttgccgaatttaaagcagaattagcagcgcacttt
ggtctgggcttggaaggatatgccacttggacatcaccaattcgtaaatattccgatatg
gtgaatcaccgcttaatcaaagccgtactgacacaacaaccttatgaaaaaccacaagac
gaagtgttagcacgcttgcaagaagcccgccgccaaaatcgcttggtagaacgtgatatt
gccgattggttatattgtcgctatcttgtcgataaagtggctgaaaatgcagaatttgat
gctgaagtgcaagatgttatgcggggaggattacgggttcaattattagaaaatggtgcg
tcaatgtttgtgccggcctctacccttcataataataaagaggaaatccaagtgaatacc
gatgaactcgccctctacattaaaggtgaacgggcatacaaaatcggggatattgtgcgt
gtaaaactcacggaagtaaaagaagcaacccgaagtattgttggttcagtggtgatttag
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