Pasteurellaceae bacterium NI1060: AC062_1188
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Entry
AC062_1188 CDS
T10491
Name
(GenBank) Selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
pban Pasteurellaceae bacterium NI1060
Brite
KEGG Orthology (KO) [BR:
pban00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pban03012
]
AC062_1188
Translation factors [BR:
pban03012
]
Eukaryotic type
Elongation factors
AC062_1188
Prokaryotic type
AC062_1188
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_SelB
GTP_EFTU
WHD_2nd_SelB
WHD_3rd_SelB
WHD_2nd_SelB_bact
GTP_EFTU_D2
WHD_1st_3rd_SelB
MMR_HSR1
RsgA_GTPase
PduV-EutP
SRPRB
Motif
Other DBs
NCBI-ProteinID:
AOF53281
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Position
1281834..1283705
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AA seq
623 aa
AA seq
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MIIVTSGHVDHGKTALLKALTGTHTAHLPEEKKRGMTIDLGYAYLPFSSQDGSKTLGFID
VPGHEKFLSNMLAGLGGIHYAMLIVAADEGIAAQTKEHLAILHRLQFNEIIVVLTKSDRA
SSTQIDTLIQQIKQNYAFLRGANYFVTSAETGQGIAELRHYLQCLPELDDSQKPFRYAID
RVFSVKGAGTVVTGTAFTGAVKINDELYLSTGQKVRVKAIHAQNMPSEQGFAGQRLALNL
NVDLDRIPTKRGDWLLQDIPPQPTDRISVQIQAETLLNESQSVHIYHAASRTTGKLTLLQ
GKNVAENDRTLAEIILDSPLFLAFDDKLIIRSGDAKTLLAGARVLEIDSPKRYKRTEVRL
NFLHNLSLSENASQRIALMLQHHAIAAKRLMWIEQLTEKQLNVALTQCGAVRYQDWCFNA
DYQQEKTQQILTALSTYHEQHNDQLGVSKARLYRMAALNQPENLIDHFIDEMLETGALQQ
TRGWLHLPAHKIRFTAEEQQYWSNVLNEFEKANGQAVWVRDMANALGTDENSMRNFMYKA
GKLGYLTPIVKDRFFLTETIYAYARLIKQIAEEEGKTSVNEVRDRLNFGRKLTVQLMEYF
DRIGFLRRKGNDHILRDENIFDL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtcacctcagggcacgttgatcacggcaaaacggcgttactaaaagcgtta
accggtactcataccgcccatttaccggaagaaaaaaagcgtggtatgacaattgatctt
ggttatgcctatttgcctttttcttcccaagacggctcaaaaacattgggttttattgat
gtgccggggcacgaaaaatttctttctaatatgctggcagggttaggcggtattcattac
gccatgctaattgtggcggcagatgaaggcattgccgcacaaactaaagaacatttggcg
attttgcatcggttacaatttaatgaaattattgttgtgctaacaaaatcagatcgagca
agttcgacacaaatcgatacattaatacaacaaatcaaacaaaattatgcatttttacgt
ggggcgaactattttgttacctccgccgaaaccggacaaggtattgcagagctgcgtcac
tatttgcaatgcttgccggaattagacgactcacaaaaaccgtttcgttatgcgattgat
cgtgtctttagtgtgaagggtgccggtacggtagttactggaacggcatttacgggggcg
gtgaaaattaatgatgaactctatctttccaccggtcaaaaagtacgggtgaaagccatt
catgcacaaaatatgccgagtgaacaaggttttgcaggacaacgtttggcgctgaatctt
aatgttgatcttgatcgcataccgacaaaacggggggattggctattgcaggatataccg
ccgcaaccaacagatcgtattagtgtacaaattcaggctgaaaccctgttaaatgaaagt
cagtcggtgcatatttatcatgctgccagccgaaccacaggtaaattaacgttgttgcaa
ggcaaaaatgttgcagaaaatgaccgcactttggctgaaattatcttggattcaccgctg
ttcttggcattcgatgacaaactcattattcgaagcggtgatgcaaaaacgctgcttgcc
ggtgcgcgtgtattagaaattgattcgccaaaacgttataaacgaacggaagtgcggttg
aattttttgcataacctgagcctatcggaaaatgcctcgcaacgtattgcattaatgctt
caacatcatgcgatagcggcaaaacgattaatgtggatagagcaactcaccgaaaaacaa
ttgaatgttgctttgacacaatgcggggcggtgcgctatcaagattggtgttttaatgcc
gattatcagcaggaaaaaacacagcaaattttgaccgcacttagcacctatcacgagcaa
cataatgatcaactaggggttagcaaagcccgcctataccgtatggcggcactcaatcaa
ccagaaaatttgattgatcattttattgatgaaatgctggaaacaggggcattgcagcaa
acaagaggttggttgcatttgccagcgcataaaattcgctttaccgcggaagagcaacaa
tattggtcgaatgtgttgaatgaatttgaaaaagctaacggacaagcggtttgggtgcgt
gatatggcaaatgctttaggaacagatgaaaactcaatgcgtaattttatgtataaagcg
ggtaaattgggctatcttacccctattgtcaaagatcgtttctttttaacggaaactatt
tacgcttatgcacgtcttattaaacagattgctgaagaagaagggaaaacctctgtaaat
gaagtgcgtgaccgcctaaattttgggcgcaagctcactgttcaactcatggaatatttt
gatcgcatagggtttttacgtcgtaaaggcaatgatcacattttacgtgatgagaacata
tttgatttataa
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