Pasteurellaceae bacterium NI1060: AC062_1459
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Entry
AC062_1459 CDS
T10491
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pban Pasteurellaceae bacterium NI1060
Brite
KEGG Orthology (KO) [BR:
pban00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pban03009
]
AC062_1459
Enzymes [BR:
pban01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AC062_1459
Ribosome biogenesis [BR:
pban03009
]
Prokaryotic type
rRNA helicases
AC062_1459
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
HypF_C_2
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOF53551
UniProt:
A0A1B3JHK8
LinkDB
All DBs
Position
1571986..1573308
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AA seq
440 aa
AA seq
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MNSPQFEQFDLSSELLKALEKKGYKRPTAIQMEAIPAAMEERDVLGSAPTGTGKTVAFLL
PALQHLLDYPRRKPGPPRILVLTPTRELAMQVAQQAEELAQFTHLNIATITGGVAYQNHG
EVFNTNQDLVVATPGRLLQYIQEENFDCRSVEILIFDEADRMLQMGFGQDAEKIAAETRW
RKQTLLFSATLEGELLVDFAERLLNDPVQVDAEPSRRERKKINQWYYHADSYEHKVKLLA
RFIETEKVSRGIIFVRRRENARELSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSDVVT
VLVATDVAARGIDIDDVSHVMNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYKLL
GKIKRYTEEILKARVLAGLEPRTKPPKDGEVKSVSKKQKARIKTKREEKKKTEAKKKVKL
RHKDTKNIGKRRKASSQQEN
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccccaatttgagcaatttgatctttcctcggagctcttaaaagcacttgag
aaaaaaggctacaaacgtccaactgcgatccaaatggaagccattcctgctgcgatggaa
gagcgtgatgtgctaggctcagcaccaaccggcacaggcaaaaccgttgcttttttatta
ccggcattgcaacatctgcttgattatccacgccgtaaacccggcccgccacgtattctt
gtattaaccccaacccgtgagttggcaatgcaggtggcgcaacaagcggaggaattggca
caatttacccatttaaatatcgccactatcaccggcggtgtggcatatcaaaatcatggt
gaagttttcaataccaatcaagatttggtggtggcgacaccgggtcgtttattgcaatac
attcaagaagaaaattttgattgccgttcagtggaaatattaatttttgatgaagcggac
agaatgttgcaaatgggctttggacaggatgcggaaaaaattgcggcggaaacccgttgg
cgcaaacaaacgttattattttcagcaaccttagagggtgaattattggtcgattttgcc
gaacgtctgcttaatgatcccgtacaagtggatgccgaaccaagccgtcgtgaacgtaaa
aaaatcaatcaatggtattatcacgccgatagttatgaacacaaagtgaaattattggct
cgttttattgaaacagaaaaagtaagccgaggcattatttttgtgcgtcgccgtgaaaat
gcccgagagctttccgaaaccttgcgtaaacggggtattcgttccgcttacttggaaggt
gaaatggcacaaacccaacgtaacaatgccattgataaattgaaatcagatgtggtcacg
gtgttagtggcaaccgatgtagcggctcgtggtattgatattgatgatgttagccatgtg
atgaattttgacttgccatatagtgcggatacttacctacatcgtattgggcgtaccgct
cgagcgggcaaaaaagggacggcggtatcttttgtggaagcccacgattataaattgctc
ggcaaaattaagcgttacacggaggaaattctaaaagcccgtgttttagcaggcttagaa
ccccgcaccaaaccaccgaaagacggcgaggtgaaatcagtgagtaaaaaacaaaaagcc
cgtatcaaaacaaagcgggaagaaaagaaaaaaacagaggcgaagaaaaaagtgaagcta
cgtcacaaggatacgaaaaatattgggaagcggagaaaggcgagttcacaacaagaaaat
taa
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