Pasteurellaceae bacterium NI1060: AC062_1699
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Entry
AC062_1699 CDS
T10491
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pban Pasteurellaceae bacterium NI1060
Pathway
pban03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pban00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AC062_1699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pban03021
]
AC062_1699
03019 Messenger RNA biogenesis [BR:
pban03019
]
AC062_1699
Transcription machinery [BR:
pban03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AC062_1699
Messenger RNA biogenesis [BR:
pban03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AC062_1699
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
AAA_22
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
AOF53791
LinkDB
All DBs
Position
complement(1774319..1775581)
Genome browser
AA seq
420 aa
AA seq
DB search
MHLTELKNTPVSDLVKLGEEQMGLENLARLRKQDIVFAILKQHAKSGEDIFGGGVLEILP
DGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLQTGDKIEGKIRPPKEGERYFALLKVDQV
NDDKPEVSRSKILFENLTPLHANSRLKMERGNGSTEDLTARILDLASPIGKGQRGLIVAP
PKAGKTMLLQNIAQSITHNYPECELIVLLIDERPEEVTEMQRSVKGEVIASTFDEPAARH
VQVAEMVIEKAKRSVEHKKDVVILLDSITRLARAYNTVTPASGKILSGGVDANALHRPKR
FFGAARNVEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMELHLSRKIAEKRVFPAID
FNRSGTRKEDLLTTPDELQKMWILRKILNPMGEVEAMEWLIDKLGVAKTNEEFFEIMKRS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaacagaacttaaaaatacgcctgtttcggatctagtgaaacttggcgaagag
caaatgggcttagaaaatttagcccgtttgcgtaaacaagatattgtctttgcaatctta
aaacaacatgccaaaagcggtgaagatatctttggcggcggcgtgttagaaattttaccc
gatggtttcggttttttacgttctgccgacagttcttatttagcgggtcctgacgatatt
tatgtttcaccaagccaaattcgtcgttttaacttacaaactggtgacaaaattgaaggt
aaaatccgaccgcctaaagaaggtgagcgctattttgccctacttaaagttgatcaagtc
aatgatgacaagcccgaagtatcccgtagtaaaattctctttgaaaacttaacaccgctc
catgccaactcccgtctcaaaatggaacggggtaacggctcaaccgaagatttaaccgcc
cgtattttggatttagcctcaccgattggtaaaggtcaacggggtttaattgttgcgcct
ccaaaagccggtaaaaccatgctactgcaaaatattgctcaaagcattacccataattat
ccggaatgcgaactcatcgtcctgttaattgatgaacgcccggaagaggtaacggaaatg
caacgctcggtaaaaggtgaagtgatcgcttctacttttgatgaaccggctgcacgccat
gttcaagtggcagaaatggtgatcgaaaaggctaaacgttccgtcgaacataaaaaagat
gtggtaattttacttgattccattacccgtttggcccgtgcttataatacggttacaccg
gcttccggtaagattttatcaggtggtgtggatgccaacgcattacaccgtcctaaacgt
ttcttcggtgccgcccgtaatgtagaagaaggtggtagtttaacgattattgcgaccgca
cttgtcgataccggctcaaaaatggatgaagtaattttcgaagaatttaaaggaaccggt
aatatggaacttcatctttcccgtaaaattgccgaaaaacgcgtattcccagctattgac
ttcaatcgctcgggaacacgtaaagaagatttactcaccacacctgacgaactgcaaaaa
atgtggattctacgcaaaatccttaacccaatgggtgaagtggaagcaatggaatggctc
attgacaaactcggtgttgcaaaaaccaatgaagagttttttgaaattatgaaacgttcg
taa
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