Pasteurellaceae bacterium NI1060: AC062_1972
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Entry
AC062_1972 CDS
T10491
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pban Pasteurellaceae bacterium NI1060
Brite
KEGG Orthology (KO) [BR:
pban00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pban03016
]
AC062_1972
Enzymes [BR:
pban01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AC062_1972
Transfer RNA biogenesis [BR:
pban03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AC062_1972
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Plectin_PPL
Motif
Other DBs
NCBI-ProteinID:
AOF54061
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All DBs
Position
2087331..2088485
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AA seq
384 aa
AA seq
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MIKECQEPLHFSLITTNQELSEICQLARQKSAVALDTEFVRVSTYFPKLGLIQLYDGENV
SLIDPLSISDFSPFVELLADPDVLKVLHSCSEDLVVFLQEFDQLPQPMIDTQIMARFLGL
GNSVGLAKLALNYLNIKVDKGATRTNWIKRPLSENQLHYAAGDVWYLLPIYSCLQKELVA
TPWQSAVQADCELALSKIKKLQTRDVESAYLDIPNSWKLNPLELARLKILAQWRQEVAME
RNLALSYVVKSENLWKVAKYNPRNTSEMLEMGLSNNEVRVRGKKILQLLAKARRVSPYDY
PKRIVRIADDPRYKKAIRLLQEKAYELTPQGLTLEILASKRSLEELIKWVWLHDESPDKL
PDLLVGWRREIGLQLLALLKSIEF
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagaatgccaagaaccattgcatttttcattgatcacaacaaatcaggagctg
agtgaaatttgtcaattagcacgccaaaaaagtgcggttgctttagacactgaatttgtg
cgggtatcgacttattttccgaaattgggtctgattcaactttatgacggggaaaatgtt
tctctgattgaccctttaagcatcagcgatttttcgccttttgttgaattattggctgat
cctgatgtgcttaaagtgctccattcttgtagcgaagatttagttgttttcttacaggaa
tttgatcaattgccccaaccaatgattgatacgcaaataatggcacgtttccttggatta
ggaaattcagtgggattggcaaaattggcactaaattatttaaatatcaaagtggacaag
ggggcgaccagaacaaattggattaaacgccctttatcggaaaaccaactgcattatgcc
gcaggcgatgtgtggtatttgttgccgatttactcttgtttacaaaaagagctggtggca
acgccttggcaaagtgctgtgcaggcagactgtgaacttgctttatcaaaaatcaaaaaa
ctgcaaacacgtgatgtggaaagtgcttatttagacattccaaattcatggaaacttaat
ccattggaacttgcccgattaaaaattttggcacaatggcgacaagaagtggcaatggaa
cgtaatttggcgctttcttatgtagttaaatcagaaaacttatggaaagtggcaaaatat
aatccgcgtaatacgtcggaaatgcttgaaatggggctttccaataatgaagtaagagta
cgtggtaagaaaattttacaactcttagcaaaggcacgtcgggtatcaccttatgattat
ccgaagcggatcgtgcgtattgccgatgatccccgttataaaaaggcaattcgcctctta
caagaaaaagcgtatgagctaacgcctcaaggattaacattagaaattttagcgagtaaa
cgaagtttggaagaattaatcaaatgggtttggctacacgatgaatcaccggataaatta
ccggatttattagttggttggcgtagagaaattggattacagcttttggctttattgaaa
tcgatagaattttaa
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