Engelhardtia mirabilis: Pla133_15880
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Entry
Pla133_15880 CDS
T09909
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pbap
Engelhardtia mirabilis
Brite
KEGG Orthology (KO) [BR:
pbap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbap03016
]
Pla133_15880 (rnd)
Enzymes [BR:
pbap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Pla133_15880 (rnd)
Transfer RNA biogenesis [BR:
pbap03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Pla133_15880 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QDU66513
UniProt:
A0A518BHU9
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All DBs
Position
2127794..2129005
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AA seq
403 aa
AA seq
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MSLPPPTYVDDKRSFNALLDRLDDVDELAVDTEADSFFKHRERVCLIQITADGEDFIVDP
LVGLDIEPLGEVFADPRRVKIFHDSEFDVLLLKRHHGFEFAELFDTRVALAAMGYESLGL
AAALLDQFGVKLDKTQQLSDWGRRPLTDKQIGYARLDTHYLIELRERLEVMLDEVGRRHV
MEAECDRLERLEPVDRPFEPDEYVRLKGARTLDRSQQAVLRALFIARERMAQERNVPPFK
VLAHGGLVDLARACPKDAEGISRAAKINSSAANRLAKPLLAAIREGLDAGPIDSMPQLPP
KDGTLGFDEFDHELHDRLKTLRKKLAERDRMDLSLVFNRKTLLDLVRSGARDREALARVE
DLAAWQLEDYGADLIRVLEKFDRDRASGALDAKPRKRRPERRR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
ttgagccttcctccgcccacctacgtcgacgacaagcggtcgttcaatgccctgctcgat
cgtctcgacgacgtcgacgagctcgcggtcgatacggaggcggactcgttcttcaagcac
cgcgagcgtgtatgcctgatccagatcaccgcggacggcgaggacttcatcgtcgatccc
ctggtgggtctcgatatcgagccgctgggcgaggtcttcgcggatccgcgccgggtcaag
atcttccacgacagcgagttcgacgtgctgctgctcaagcggcaccacggcttcgagttc
gcggagctgttcgacacgcgcgtggccctggccgccatgggctacgagtccctgggcctg
gccgcagcgctgctggaccagttcggggtcaagctcgacaagacacagcagctttcggac
tggggacggcggcccctgacggataagcagatcggctacgcgcggctcgacacgcactac
ctgatcgagctgcgcgagcgactcgaggtcatgctcgacgaggtcggtcggcgccacgtg
atggaggccgagtgtgaccgcctggagcgtctcgagccggtggaccgccccttcgagccc
gacgagtacgtgcgcctgaagggcgcgcggaccctggatcgaagccaacaggcggtgttg
cgcgcgctgttcatcgcgcgcgagcgcatggcgcaggagcgcaacgtgccgcccttcaag
gtcctggcccacggcgggctggtcgacctggctcgggcctgcccgaaggatgccgagggc
atctcgcgcgccgccaagatcaactccagcgccgcgaaccgcctcgccaagccgctcctg
gcggcgatccgcgagggcctggacgccggacccatcgactcgatgccccagttgccgccc
aaggacgggaccctgggcttcgacgagttcgaccacgagctccacgaccgcctgaagacc
ctgcgcaagaagctcgcggagcgggaccggatggacctgtccctggtcttcaaccgcaag
accctgctggacctggtgcggtcgggcgcgcgggatcgcgaggccctggcgcgggtcgag
gacctggccgcctggcagctcgaggactacggcgcggatttgatccgggttctggagaag
ttcgaccgggaccgcgccagcggagccctggacgccaagcctcgcaagcgacggcccgag
cggcggcgctga
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