Pogonomyrmex barbatus (red harvester ant): 105422141
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Entry
105422141 CDS
T04903
Name
(RefSeq) tRNA pseudouridine synthase-like 1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbar03016
]
105422141
Enzymes [BR:
pbar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
105422141
Transfer RNA biogenesis [BR:
pbar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
105422141
Prokaryotic type
105422141
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
105422141
NCBI-ProteinID:
XP_011629705
UniProt:
A0A6I9VMI1
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MVRYLLKFSYIGTHYRGLQRQPSENFIRDTDSIQGALEAALLTIVPRSVIRPSLCLSSRT
DAGVHAFGNSAHVELENKYSTIYKASDIKQKVNRYFFNCNHYIRLLDCTPVTYDFHSRAS
CKSRTYLYRFMIPKVEEEHRVSLPESIHTFHLRSHNFNIDRARRGTQLFIGKKDFTTFSA
KSVTDRKIEYVRSLQSFTLEEAQPLMPFDPLSQNFTYWHFICKGKSFLYKQVRRMVGALI
ALGMGHITEKDITIMLQVPSHQNLHPRVIPVPSHGLHLLNIEYDLDELKRCTIPEEEEPQ
SKDTVQRCN
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggtacgatatttgcttaaattttcgtacattggtacacactacaggggtttgcagagg
caaccttccgaaaactttatacgggatacggattccattcaaggtgctctagaagctgct
ctattaaccattgtaccaagaagtgtaattaggccatccttgtgtctttctagcagaacg
gatgctggagttcatgcttttggcaacagtgctcatgtagagcttgaaaacaaatatagt
acgatatataaagcatcagatataaaacaaaaagttaatcgttacttcttcaactgcaat
cattacattagattactggactgtacacctgttacatatgactttcactcaagagcttca
tgtaaatctcgaacttatttgtacagatttatgatacctaaagtagaagaggaacatcga
gtatctcttccagaatcaatacatactttccacctaaggtcacataatttcaatatagac
agagcaagacgtggtacacaattatttatagggaaaaaagattttactacgtttagcgct
aagtcagtaacagatcgtaaaatcgagtacgtacgttccttacagtcttttactctcgaa
gaagcacaacctttaatgccttttgatccactgtctcaaaattttacatattggcatttc
atttgcaaaggaaaatcttttctgtataaacaggtcagacgaatggtcggtgctctaatc
gctttaggtatgggacatataacagagaaagatattactataatgttacaagttccttct
catcaaaacttgcatccccgtgttatacctgtaccatcgcatggcttgcatctattaaat
atagaatatgatctggatgaattaaaacgttgcaccataccagaagaggaagaaccgcaa
tcgaaagatacagtccagagatgcaattaa
DBGET
integrated database retrieval system
