Pogonomyrmex barbatus (red harvester ant): 105422306
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Entry
105422306 CDS
T04903
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03030
DNA replication
pbar03420
Nucleotide excision repair
pbar03430
Mismatch repair
pbar03440
Homologous recombination
pbar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105422306
03420 Nucleotide excision repair
105422306
03430 Mismatch repair
105422306
03440 Homologous recombination
105422306
03460 Fanconi anemia pathway
105422306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pbar03000
]
105422306
03032 DNA replication proteins [BR:
pbar03032
]
105422306
03400 DNA repair and recombination proteins [BR:
pbar03400
]
105422306
Transcription factors [BR:
pbar03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105422306
DNA replication proteins [BR:
pbar03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
105422306
DNA repair and recombination proteins [BR:
pbar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
105422306
MMR (mismatch excision repair)
105422306
DSBR (double strand breaks repair)
HR (homologous recombination)
105422306
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
POT1
Pox_vIL-18BP
CDC24_OB3
CompInhib_SCIN
zf-AN1
Motif
Other DBs
NCBI-GeneID:
105422306
NCBI-ProteinID:
XP_011629930
UniProt:
A0A6I9VVY8
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MYDLTEGALEQIMRGVDVEKPILQVLGFKKLPKTVSKDGSSTDRYRLLLSDGQRLNSFTM
LATQLNNLIEENILTEFAICEILNYHLTAVNNGGKEKRLILILGLEVIVSGNEVGCKLGN
PTNIDSTVTEAESSSSTSTSVSTTTSTRYQTNGSVRSGTSHQASSDISTTPIAALSPYQN
RWVIKARVTSKSGIRTWSNSRGEGKLFSMDLIDESGEIRCTAFRDMCDKFYDMIEPKNIY
YISKCALKAANKQFNTLKNDYEMTMTNETEIIPCFENSDDIPTLQFNFVSINQIENKEKN
DIIDVLGVVSSVSDIVHLTRRTTGQDLVKRDLNIVDDSGTMVCVTLWGKQAEDFDGSNNP
VVAIKGARIGEFNGGKNLSLINSSVIEKDPDIPEAHRLIRWYTAGGHSETVKSLSRAGGS
GDSNAPLYTFQEIAEARLGEKMGSPDLFSVVATINLVRVENSIYKACPVESCKKKLIDQS
TGIFRCEKCNKDYPNFMYRLLLSMNIADATGSRWITAFNEEAEKILGASAQELGELKETD
NDAYMQKFGEASFKRFTFTLRARTEVFQDEMRLKFQCTSVAPLNYRNYLVYLIDKVSKLV
HIEKLDN
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgtacgatttgacggaaggagcgttggagcaaatcatgcggggcgtagatgttgaaaaa
ccgattctccaagtattgggtttcaaaaaactaccgaaaactgttagtaaggatggttcc
agtacagatcgatatagattactgttgtctgatgggcagagattaaactcgttcactatg
ttggcgactcaattgaataacctcattgaagaaaatattttaaccgagtttgcgatctgc
gagatattaaactatcacttgactgcagtgaacaatggcggcaaagaaaaacgtttgata
ttgatcctgggccttgaggtcatagtttctggcaacgaagtcggctgtaagttaggcaat
ccaactaatatagactcgactgtaacggaggctgagtcatcctcctctacatctacatct
gtatctacaactacatctacgcgttatcaaactaatggttcagttagaagtggtacttca
catcaagcttcttctgatatatccacgacaccaatcgcggcattaagtccttaccaaaac
agatgggtgatcaaggctcgtgtgacgagtaaatctgggatcagaacatggagcaattct
cgcggagaaggcaaacttttcagtatggatctaattgacgaaagcggtgaaattcgatgt
actgcattcagagacatgtgtgataagttttatgacatgatagagcctaaaaatatatac
tacatctcgaaatgtgcactgaaggcggcgaacaagcaattcaatacactgaaaaatgat
tacgagatgacgatgaccaatgaaacagagatcataccatgctttgaaaacagtgacgat
atcccgacactgcagttcaactttgtttccataaatcaaatagaaaacaaggagaaaaat
gacataatagatgtcttaggcgtcgtatcgagcgtcagcgatattgtacatctcacgagg
cgaactactggtcaagatctcgtgaagagggatcttaacatcgtcgatgacagcggtacg
atggtgtgtgttacattatggggaaagcaggctgaagactttgatggttctaacaatccg
gttgtcgcaattaaaggagcacgcattggcgaattcaatggcggaaagaatttatctctt
ataaattcatctgtcattgaaaaagatcctgatattcctgaagcacataggcttatcaga
tggtatactgcaggtggccattcggagactgttaaatcattgtctagagcaggtggaagt
ggtgattccaacgcgccattgtacacgttccaagagatagccgaagcccgattgggagag
aaaatgggttctccagatttgttttcagtggtggcgaccattaacttggtccgcgtagag
aactctatctataaagcatgtcctgtagaaagttgcaagaagaaattgatcgatcagtcc
actggtatatttcgatgtgaaaaatgtaataaggattacccgaattttatgtaccgtttg
ctgctatctatgaatatagcagacgcgacaggcagtcgctggataactgccttcaatgag
gaagccgagaagatattgggggcatcagcgcaagaattgggagaattgaaagagactgat
aacgatgcctacatgcagaaatttggagaggcgagctttaagagattcacattcactttg
agggcaagaacagaagttttccaggatgaaatgaggctaaaattccaatgtacatcagtc
gcgccgcttaattacagaaattacctggtatacttgatagacaaggtctccaagctagtt
cacatcgaaaaattggataattag
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