Pogonomyrmex barbatus (red harvester ant): 105422346
Help
Entry
105422346 CDS
T04903
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105422346
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pbar01009
]
105422346
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pbar04131
]
105422346
03029 Mitochondrial biogenesis [BR:
pbar03029
]
105422346
Protein phosphatases and associated proteins [BR:
pbar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105422346
Membrane trafficking [BR:
pbar04131
]
Autophagy
Autophagosome formation proteins
ULK complex
105422346
Mitochondrial biogenesis [BR:
pbar03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
105422346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
105422346
NCBI-ProteinID:
XP_011629987
UniProt:
A0A6I9VTJ0
LinkDB
All DBs
Position
Unknown
AA seq
1463 aa
AA seq
DB search
MLYIFHVDTGTTITFDIKLALQSVSQLMEAIERECGVVAAHQVLLMSGGECLEPNARVCS
YSAGTDTNPIYLFSKAAIESSLPPTPSIDYGSDVDLQTQIDASLAMPATYQTLCARAHLA
QQCCGLAREQTRICERLVHDQHLQQQGWAAVVANLEDITQMFQSRAEQFQQAFVLYLAER
QQHMKLLDNFSADLGTLAKIPILPALRAQAEGLLSPDDQPSQTSETTSEDSGEVLSLLRW
ISAKDNQSSLEQVAYQCSRGLEQFDERLMQALKAEVNAAIDNANKQDMKEIKGLGERLFA
LEQLMVQTKRLVHEQGELAQGFLQNQNRASNLGDASVLPDLCNSHRRQLLVMLQNHNQLR
DIRRRCTKAKEELSVNIYHRLKWIMYVENKMVEVGNKLIIYHESLKRLRRHLDVLQQIHL
APQMYLSAVVEVVRRRTFSQAFLVWASNLACQLLTVHSEELARRREFQSKFDGHFLNTLF
PGLEDTPPPFATQAPSVFDNGLPKLTVDDMESLRSQLPDLALSISTPDLSSITQFFLSKS
FTEGSTDGNKEKDTTSVSTDIPAKEQERTRAPLLSDRGDFESETDTEEFEKIGQAGVDAT
KPGVFDGAKQKRQKQLEVGASRSVSPASSTSTNVSPLNSKVADLMTRSSTSSEPGSFQFP
SLSATSERPVQLSPLTECVENGAADSSNCLLRSGASGLSNYRDALPLEEQHSLSPNPPSL
PRSSVMCDGQHQQHQHPLSGSGGSSPSVGVGATDFMGTEFYMDESLPSSLSEHPADGQHQ
ALVSLLQENLGNTREEVERLRSILKTMKTVVCEELSSVRNELAILRDRSHEDKSGLVEMT
ERVRVALSLHSREYDRRLQEREQELTIEHEYEIADVKKLMQNREEEICTLKRNLLEKETE
LAEHERLVATMHQKLEDEQIERRNLQTRLHQQLEDYSRILEQARIDKEEAVKKTNDERFL
EITSLTNSLTQCQKRIQELEENLATARNDQERMVKEATDKLQIEYKTELETIRSRFKLMA
ASTMERSPSDSSLEKIERTDVIELANHEAILAQAREDMKVENAMAVRTAIEKERADCMAK
LDNELRLAKEVVEEKNREIEIYRVRTAVLIEQGKRYKNMIDRLIGEFELKSEIQQTLTEK
MKNLEADKAWLESKEAAEKTMRTVLEQNEDIGYSVESGVHKDLSYDRLDAAQSELEDVFK
DLESEKYEVEVSESKKVRLEADDDDLARLSRRLESLENDNKRLSCELNSIRASKVAAEAK
VEALMTDKIRLEIELLKERTKRFSTESMPSESRDKDMNASVAVVSDANSSRDAATSPEPS
RRSSSKSICFHPSLPSYIHKKVAEKVAKMVQQGIITVTSCNPGDVVLVVWDGMHNNYAVY
QESSTFYFLHSDYIDALDVGVKPSVYRKCILAEVIDKEYCHARKQENRYHVPRGTKFYRV
RAKPRDSRALTDDTGSMSKSQLP
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgctttacatcttccacgttgacaccggcaccaccatcacctttgacatcaagctggca
ctacaaagtgtcagccagctgatggaggcgatcgagagggaatgtggcgtggtagcggcg
catcaggtgctgctcatgagcggaggcgagtgcttggaaccaaatgcacgtgtatgctcc
tactcggctggtaccgacacgaatccaatctatctgttcagcaaggccgccattgagagc
agccttccacccacgccgagtatagattacggttccgatgtcgacctgcagacacagatc
gacgcctcgctggcgatgccggccacctaccagaccctttgtgcacgtgcccacctggcc
cagcagtgttgcggcctggcgcgagagcagacgaggatctgcgagagactggttcacgat
cagcatctccagcagcaaggctgggccgcggtagtcgcaaatctcgaggatatcacacaa
atgtttcagtcacgggccgagcagttccaacaagctttcgtcctgtacctcgccgagagg
cagcagcatatgaaacttctcgacaattttagcgcggatcttggtactctcgcaaaaatt
ccaattttgccggccttgagagctcaggccgaaggtttattgagtccggatgatcaaccg
agtcagacttctgagaccacgtcggaggatagcggggaagtgttgagtctgcttcggtgg
atctctgcgaaagacaatcagagcagcttagagcaagtggcgtatcaatgctcgcgtggc
ttggaacagttcgacgaacgattgatgcaagccttgaaagctgaagtgaacgcagccatc
gacaatgctaacaaacaggatatgaaggagattaagggcctaggcgagaggctgtttgcc
ctggaacagctgatggtacagactaagaggctcgttcacgagcagggcgagcttgctcag
ggctttcttcagaatcaaaatcgtgcgagcaatttaggtgatgcgagcgttctgccagat
ctttgcaattcccaccggcggcagttactcgtcatgctgcagaatcacaatcagttgcgc
gacatccgccgtagatgtaccaaggcgaaggaggagctctcagtgaatatctatcatcgc
ctgaagtggattatgtacgtggagaacaagatggtggaagtgggcaacaagctaatcata
tatcacgagagtttgaagcggttgcgacggcatctggatgtgctccaacagatccacttg
gccccgcaaatgtacctaagcgccgtagtagaagttgtcagaaggcgtaccttttcgcag
gcttttctcgtatgggcgagcaatttggcatgccagttgttgactgttcacagcgaggag
ttggcgcgtaggcgagaatttcagagtaaattcgacggtcacttcttgaatactctcttc
ccaggtttggaggatacgccgccgccttttgcgacgcaagcaccttctgtttttgataat
ggattgcctaagctgaccgtggacgacatggagtcattaagatcacagcttccagacttg
gcgctttcgatctctacaccggatttgagcagcatcacgcagtttttcttatccaaaagt
tttaccgaaggtagcaccgatggcaacaaggagaaggatacgacatctgtgagcaccgat
attcccgcgaaagaacaagaacgtaccagagcaccgttgttgtccgacaggggcgacttc
gaatccgaaaccgacacggaggagttcgagaaaatcggtcaggccggcgtggacgcgacc
aagcctggcgtgttcgacggggcgaaacagaaacggcagaagcaattggaggttggtgcc
tctcgaagcgtgtcccccgcttcctcgacctcgactaacgtctccccgctaaactcgaaa
gtcgcggacctaatgacgcgttcgtccacgtcaagcgaacccggctctttccaatttccc
agcctgtccgccacgagcgaacgcccggtgcagctgagtccgctgaccgagtgcgtggag
aacggcgccgccgattcctccaattgcttgctccgcagcggtgcaagcggtctttcgaac
tatcgcgacgccttgccgctcgaggaacaacattccctcagtccgaatcctccttccctg
ccacggtcctccgtcatgtgcgacggccagcatcagcaacatcagcacccgctgtctggt
agcggtggtagcagtccttccgtcggcgtgggtgctaccgacttcatgggtaccgagttt
tacatggacgagtctctgcccagcagtctcagcgaacatcccgccgacggtcaacatcag
gctctcgtgtccctccttcaggagaatcttggtaatacgcgcgaagaagtggaaagattg
agatccattctgaagactatgaagacggttgtatgcgaggagcttagttctgttcgaaat
gaattggcgattctgcgcgatcgatctcacgaggataaaagcggcctcgtcgaaatgacg
gaacgtgtacgggtagcattatccctgcattcgcgggaatatgatcgacgtcttcaagag
cgcgagcaggaactgacgattgagcatgaatacgagatagcggatgttaagaagctgatg
cagaatcgcgaagaggagatctgcacgctcaaacgtaatcttctggaaaaggagactgag
ttggcggaacacgagcgattggtcgccacgatgcatcaaaagttggaggatgagcagatc
gagaggaggaacttacaaactcgtttacaccagcaactcgaggactattcgagaatacta
gagcaagcgcgcatagacaaggaggaggctgtgaaaaagacgaatgacgagagattcctc
gagatcacctctctgacaaattctttgacgcaatgtcagaaacgaattcaagagctggaa
gagaatctggcgactgcgcgcaacgatcaagagagaatggtgaaagaggcgaccgataag
ctgcagatagaatataagacggagttggaaactattcgaagccgttttaaacttatggct
gcttctaccatggaaagaagtcctagcgactctagtctagagaagattgagcggacggat
gttatcgagcttgcgaatcacgaggcgattttggcgcaagcaagagaagatatgaaagtt
gagaatgccatggcagttcgtaccgctatcgagaaagagagggctgactgcatggcgaaa
ttggataacgaattaagattggcgaaggaagtagtcgaagagaaaaatagggagatagag
atatatagagtgagaacggccgtacttatcgaacagggcaagcgttataagaacatgata
gatcgattaattggagaattcgaattgaaatcggagatacagcaaaccttgacggagaag
atgaaaaatcttgaagcggataaggcatggctggagagtaaagaagccgcagagaagaca
atgcgaacggtcttagaacaaaacgaagatattggatattctgtcgaatctggagtacac
aaagatttgagttacgatcggttggatgctgctcaaagtgaactggaggatgtctttaag
gatttggaatctgaaaaatacgaagttgaagtttcagaatcgaaaaaggtgcgattggag
gctgacgacgatgatctagctcggctgtcgaggcgacttgaatctcttgagaacgataat
aagcgattgtcttgcgaattaaattcgatacgcgcgagtaaagtagcggccgaagcaaaa
gtggaggcattaatgacggataaaattcgtttggaaatcgaattgctgaaggaacgaacc
aaaaggtttagtaccgaatcgatgccatcggagagccgtgataaggacatgaacgcgtcg
gttgcggtagtttccgatgccaactcaagtcgggacgcggctacgagcccggaaccgagt
cgacgatcatcttccaaatcgatatgcttccacccttcacttccctcgtacatacataag
aaagtcgcagaaaaagtggcgaagatggtgcaacaagggatcatcactgtcaccagttgc
aatccaggcgatgtggtacttgtagtttgggatggtatgcacaacaattacgcagtgtac
caagaatcttcgactttttattttcttcattcggactacatagacgcattggatgtgggg
gtgaagccgagcgtctatcggaaatgcattctcgctgaagtgattgataaagaatattgc
cacgcgaggaagcaggaaaatcggtatcatgttccgcgtggtacgaaattctacagagtg
cgcgctaaaccacgagattcacgcgcgctgaccgacgacacaggttcaatgtcgaagagt
caactaccgtaa
DBGET
integrated database retrieval system
