Pogonomyrmex barbatus (red harvester ant): 105422370
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Entry
105422370 CDS
T04903
Name
(RefSeq) PMS1 protein homolog 1-like isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbar03400
]
105422370
DNA repair and recombination proteins [BR:
pbar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
105422370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HATPase_c
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
105422370
NCBI-ProteinID:
XP_011630022
UniProt:
A0A6I9VR35
LinkDB
All DBs
Position
Unknown
AA seq
752 aa
AA seq
DB search
MPISALDVRTVKLITTTQVITSVYAVVKELIENAIDADADNIEINLTDNGTSLIEVKDNG
CGISKEDALYMGLPSYTSKISSFEDLDTLQTFGFRGEALSALCAVAEVTIITKTEEDNVG
ISYIMDQDGQIVKQEPCHRSTGTTVQVRNLFKQVSVRRQIITNTRKANQTIKLLEALLQC
FGICKPNIRIQFRVNNNVLFTKPSLNNIKEAVNHILGRKLMSNMEWIESKNAELSLQLML
PSKNMQNLSDIFHPDLRYIFVNNRPIKHKNLEKLVNSLILEHFGQESSRKKVLFLIYIIL
SPMDIDVNLEPNKDAIMFKDQNKVLNIIDKYIRKFYGLKSAEVAEQNISIDMSTYEDYIP
NLNENVTDTEWPACKKRKIQEKIQEKVIQENFIEDDAILINCNNGYKKSPQDKQLNDNQI
HDQQHYRDALAITTNIQPPNLSDSDTNDASPVKISSNDKEAKEELTLSQLPVVNLGEDFD
SIQDIKNCNISMNENTNNLNGIQEKEQVTLETWSKGHVTGLKGGMDIKSDIAIERQLNNN
LNNEIDEILEPDRAHVDHHNLQFLKHVRLQIAKENPTLTVAQTAKKITDFWKQLSSEERG
YYRDVAKEEEKQRQEHKKIEKKIETNKAGSERNKSRLLQLFEKMKNLKNEKKEKLNMRTI
VPWIIDRSKIITRSNIDNEHIIGQLTPNLWVATICEQIWVVDIIGLIKGLKVTDTDANKI
DAKKIERLLKQWLVERDDMSVMHSICKREKFK
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgccgatttcggcactggatgtaagaacggtgaaattaattactaccacgcaagtaata
acttctgtatacgctgtggtgaaagaattaatagaaaatgcaatcgacgccgatgcggat
aacatcgaaattaaccttacagataatggtacatctcttatagaagtgaaagacaacggt
tgtgggatatccaaagaagatgcactatacatgggattaccttcctacacatctaaaata
tcaagctttgaagatctagatacgttacaaacatttggattcagaggagaggcacttagc
gcattatgtgcagtagcagaagttactattataacaaaaacagaagaagacaatgttgga
atctcatatataatggatcaagatggacaaattgtaaaacaagaaccctgccatagaagt
actggaacaacagtacaagttagaaatttatttaagcaagtatctgtgaggagacagata
attactaatacaagaaaagctaatcagactatcaaattattagaggcattactgcaatgc
tttggaatatgtaaaccgaacatacgaattcagttcagagtaaacaacaatgttttattt
acaaagccaagtttaaataatatcaaagaagctgtgaatcatatacttggtagaaaactt
atgtctaacatggaatggattgaatctaagaatgcagaactttctctgcaattaatgctg
ccttcaaaaaatatgcagaatttatcagatatttttcatcctgatttacgctatattttt
gtaaataataggcctattaagcataaaaatcttgaaaagctagtaaatagtttaatattg
gaacattttggacaagagtcatctaggaaaaaagtattatttcttatatatattattttg
agtccaatggatattgatgtcaatttagaaccaaataaagatgcaattatgtttaaagat
cagaacaaagtccttaatattatagataaatatataagaaaattttatggacttaaatct
gcggaagtcgctgaacaaaacatatctattgacatgtctacctatgaagattatataccc
aatttgaatgagaatgttaccgatactgaatggcctgcatgcaaaaaacgaaaaatacaa
gaaaaaattcaagaaaaagttattcaagaaaattttatcgaagatgatgctatacttatt
aattgtaataatggatataaaaaatctcctcaagataaacaactaaatgataatcaaatt
catgatcagcagcattacagagatgcattggctataacaaccaatatacaaccaccaaat
ttgagtgattctgatacgaatgatgcttcccctgttaaaatttcatctaatgataaggaa
gcaaaagaagaattaaccttaagtcagttacctgtagtaaaccttggtgaagactttgat
tccatacaagatattaaaaattgtaatatttccatgaatgaaaacacaaataacttaaat
ggcattcaggaaaaagaacaagttacattagaaacctggagtaaaggacatgttactgga
ctaaagggtggtatggatataaaatctgatattgctattgagagacaattaaataataat
ttaaataatgaaattgatgaaatactagaaccagacagagcgcatgttgatcatcacaat
cttcaatttctaaaacatgttagattacaaattgcaaaggaaaatcctacattaacagta
gctcaaactgcaaaaaagattactgacttttggaaacaattatcatccgaagagcgtggt
tattatcgtgatgttgcaaaagaagaagaaaaacagcgtcaggaacataaaaaaattgag
aaaaaaattgaaacaaataaagcaggctcagagagaaataagagcaggctcttgcagtta
tttgaaaaaatgaaaaatttaaaaaatgagaagaaagaaaaattaaatatgagaacaata
gtaccttggatcattgatagatctaaaataatcactagatcaaatattgacaatgaacac
ataataggtcaattgacacccaacttatgggttgctacaatttgcgaacaaatatgggtt
gtagatattattggtttaattaaaggtttaaaagttaccgataccgatgcaaataagatt
gatgccaagaagattgaacgtcttctcaagcaatggttagtagaacgagacgatatgtca
gtaatgcattctatatgcaaacgagaaaaatttaaataa
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