Pogonomyrmex barbatus (red harvester ant): 105422431
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Entry
105422431 CDS
T04903
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105422431
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Motif
Pfam:
PH_17
PDZ
PH
PDZ_6
PDZ_2
BET
Motif
Other DBs
NCBI-GeneID:
105422431
NCBI-ProteinID:
XP_011630093
UniProt:
A0A6I9WE82
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Position
Unknown
AA seq
590 aa
AA seq
DB search
MPIHARKTRTACEEIEMVELCGSGQASSAMGVMGIGSMVTAATSSSSSSTTTTTGASSSA
SGRAGILETQVRGQWYRIFVSLEDDYLSISLDESCETGNNALNNGNINNNNVDSLNDPDV
PDSVANQKRIVRVVKSDNNGLGISIKGGKENKMPILISKIFKGMAADATEQLYVGDAILA
VNGEDLREATHDEAVKALKRAGKIVELEVKYLREVTPYFRKASIIQEVGWELQRGFLSAT
PPPPKSPPRADTRYLPLQLCRLTRAHTSSDPEGRILELHSPDGVHECWLRAADNTEANVW
FNALHSALAALTLKALRLASALPDPQQLQHIGWLARRHCLQNGRASSESSEDGAGSSAST
SRGAGSGFGLAAGCTGGWRSVFGAVSGRELRLYECAPWSPEAWASPSITCPLIATRLVSS
PTRQNEAASSSSGSIQHGATFAVRVGTMDGVVTHHLRAETRRDLAAWARAIVQGCHAAAH
SLREYVVRCTWQGKACQLVVNHEEGFALYSAGTRGTAGNGVSPGSPPTPLWRRSFDKLKM
SADDGARLLWLDFGGEDGEIELDLESCPKPIVFVLHNFLSAKIHRLGLSA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcccatacacgcgcgtaaaacgcgtacagcttgcgaagaaatcgaaatggtggagttg
tgtggtagcggccaagcttcctcggccatgggagtaatgggtatcggctcgatggtgacc
gcggcgacatcgtcatcctcttcgtcgactaccacgactacaggcgcttcatcttcagcg
tcgggacgtgccgggatcctcgagactcaagtgcgcggtcagtggtatcgcatattcgtc
tctctggaagatgattatctcagcatttcgctcgatgagagttgtgagaccggtaacaat
gccctaaacaacggcaacatcaacaacaacaatgtggatagtttgaacgatccggatgtg
cccgattcggtagccaatcagaagcgcattgtccgtgtagtcaaaagtgacaacaatggt
ttaggaatttcgattaagggtggcaaggagaacaaaatgccgattctcatctcgaagatt
tttaagggcatggctgcggacgctactgagcaactttacgttggcgatgccattttggcg
gtaaatggcgaagacttacgcgaagccacgcacgacgaggcagtgaaggcgctgaagaga
gccggcaagatcgtcgaactagaagtcaagtatctgcgggaagtgacgccgtacttcagg
aaggcttcgatcatccaggaagtgggctgggaacttcagcgcggtttcctgagcgcgacg
ccgccgccgccaaagtcaccaccgcgggcggatactcgttatctgccattacaactctgc
agactcaccagagcgcatacctcttccgatcccgaaggacgtatcctagaactacactcg
cccgatggtgttcacgaatgttggttgagagccgctgacaacacggaggcaaatgtctgg
tttaacgctttgcactcggcgttggcagccctcaccttgaaagcattacgactggcctca
gcacttccggatccgcagcagcttcagcacataggctggctggcgaggaggcactgtctt
cagaacggacgagctagtagtgaaagcagcgaagacggagccggaagtagtgcaagcact
tcacgaggagccgggagcggattcggtcttgctgctggatgcacagggggatggcgcagt
gtctttggtgctgtttcaggccgggaacttagattatacgagtgtgcaccttggagtcca
gaagcttgggcttcgccgagcattacctgtccccttatcgcaacacgattggtttcctct
ccaacgcgacagaatgaagcggccagcagcagcagtggttcgatccaacatggggcgacg
ttcgcggttcgggttggtacgatggacggagtagttacgcatcatttacgagctgaaaca
cgaagagatttggcggcctgggcacgagcgatcgttcagggttgtcacgcagctgctcac
tccttgcgggaatacgttgttcgttgcacatggcaaggtaaggcctgtcaattggttgtc
aaccacgaagaaggtttcgcgctttactccgcaggaacgcggggcactgctgggaacggc
gtaagtcctggatcaccacccacgccactctggagaagatccttcgacaaattgaaaatg
tccgcggacgacggcgcccgtcttctatggctcgattttggaggtgaagatggcgaaatt
gagcttgatttggagagctgtccgaaaccaatcgtgttcgtcctgcacaattttctttcg
gcgaagattcatcggctcggactgagtgcatag
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