Pogonomyrmex barbatus (red harvester ant): 105422815
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Entry
105422815 CDS
T04903
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105422815
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pbar01002
]
105422815
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbar03021
]
105422815
03036 Chromosome and associated proteins [BR:
pbar03036
]
105422815
Peptidases and inhibitors [BR:
pbar01002
]
Metallo peptidases
Family M1
105422815
Transcription machinery [BR:
pbar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105422815
Coactivators
SAGA/TFTC/STAGA complex
105422815
Chromosome and associated proteins [BR:
pbar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
105422815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Nucleo_P87
Motif
Other DBs
NCBI-GeneID:
105422815
NCBI-ProteinID:
XP_011630632
UniProt:
A0A6I9VPL7
LinkDB
All DBs
Position
Unknown
AA seq
1204 aa
AA seq
DB search
MKKEKTGDNSRPFKLAHQILSLTGISFQRKSIIGFVELTIIPLRDTLRLIKLNAKQCRIY
RVCLNDTYEAPFQYFDPFLDICQGDNKQRSLEFFSTMHLAAAQKVDPDNNSGELVVQIPP
DAAHLVAENRGLRISIEFSLEQPQGGVHFVVPNCEGTLAERGAHMYTYSYENSSRLWFPC
VDSFAEPCTWKLEFTVDDSMTAVSCGDLVEVVYTPDMRRKTFHYVLNTPACAPNIALAVG
PFEIFVDPYMHEVTHFCLPQLLSSLKVSAKYMHEAFEFYEETLSNRYPYSCYKQVFVDEI
DEDINAYATMSILNTNLLHSTAIIDQVYITKKAMAQAIAEQFFGCFISMQNWSDTWLPKG
ISTYLTGLYAKKCFGNNEYREWIQSELQEVVKYEEQFGGIILDPSQAPAPLPIAANTPAP
APRAPDPGFYFPIKNLHTMSPKYIEVLRKKAHLIMRMLEHRIGQELLLQVFNKQLSLAAN
AAQQKIESGLWSHMLISTNVFAKAIFTVTGKDMSVFIDQWVRTGGHAKFSLSFIFNRKRN
TVELEIRQDTTHQRGIRKYVGPLVVNIQELDGTFKHTLQIEGTMARADITCHSKSRRNKK
KKIPLCTGEEVDMDLSAMDDSPVLWIRLDPEMTIMRAVQIEQPDYQWQYQLRHERDVTAQ
LEAIEALQHHPTPPTRLALTDTIENEHCYYKVRLRAAHCLTKVGNAMVATWSGPPAMLAI
FRKLFGSASCRRIIKQNNFSNFQHYFLQKTIPVAMAGLRNAHGICPQEVLAFLMDLFKYN
DNSKNRYSDNYYRAALIEALGATVTPVISVQQGTAITAESLSIDTKAILEEVTRNLNLEK
LLPCYKYTVSVACLKVIRILQKFGHLPSNPHLFRAYAAYGQFIDVRIAALEALVDFTRVD
GKWEDLEFLLDMAEMDPHPGVRHRLVRLMVENPPFERAHKHRLDKPDLVDRIWNLINGML
SHDAKLRCDLVDLYYTLYGTKVPFCLPIPEIVAITKPKKAGPPTPEREVKAAPVQYVKHE
SIEEVESLPVSNKRKASPNRDPPGPSNPGVEHGPELKRQKQDERGIPVPAEGKVKSEYYS
DNSASLPGIMGTPPGPVGFEPGMFKKESEEHKPKSDSSNKSKKKKKDKKKHKHKHKHKHD
HKHNKDKEKKEKDKNKDKEKDKDKEKEKGKDKDSSALKIKDETLSSASSSQSPEPTATNE
FLFP
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagaaaaaacgggtgataacagtcgaccctttaaattagctcatcaaatatta
agcttaacgggaataagctttcaaagaaaaagcataattggctttgtcgaattgacaatt
attcctttgcgagacacgctgaggttgataaaacttaacgccaaacaatgtaggatatat
agagtgtgtttaaatgatacctatgaagcccctttccaatattttgatccatttctggat
atctgtcaaggggataataaacaacggtccctggaatttttttcaaccatgcatttagcg
gcggcacagaaagttgatcctgataataattctggtgaattagtagttcagataccacca
gatgcagcacatctggttgcagaaaaccgaggattacgaattagtatcgaattttcttta
gagcaaccacaaggaggtgtgcattttgtggttccaaactgtgaaggaactctagctgag
agaggtgctcatatgtatacatacagttatgaaaattcatctagattatggttcccatgt
gtagatagttttgctgaaccatgtacttggaaattggaatttactgttgacgattcaatg
actgcagtatcctgtggagatttggttgaggtggtctatacacctgacatgcgtagaaaa
acatttcattacgtgctcaacactcctgcatgtgctccgaacattgctttggcagtcgga
ccttttgaaatctttgtggatccttatatgcacgaagtaactcacttctgccttcctcaa
cttttatcatctttaaaagtatctgcaaaatacatgcacgaagcattcgaattttatgaa
gaaactttatcaaatcgatatccatactcctgttacaagcaagtgtttgtcgatgagata
gatgaagacatcaatgcctatgctactatgagtattttaaatacgaatttgttacattct
actgcaattatagatcaagtatatattactaagaaagcaatggcacaagcaatcgcagaa
caattttttggatgtttcatatctatgcaaaattggtcagacacatggctacctaagggt
atctctacatatttaacaggactatatgctaaaaaatgctttgggaataatgaatacaga
gaatggattcaatctgaattacaagaagttgtaaaatatgaggaacagtttggtggtata
atattagatccatctcaagcaccagcaccattacccattgcggctaatactccagcgcct
gctcctcgtgctcctgatcctggattttattttccaattaaaaatttgcataccatgtcc
ccaaaatacatcgaagtgcttcgaaagaaagcacatttaatcatgagaatgctagaacat
agaattggtcaagaattattacttcaagtgtttaataaacaattgtctctagcagctaat
gccgcacaacaaaaaattgaatctggcttatggtcgcacatgttaattagtacaaatgta
tttgccaaagcaatttttactgtaacagggaaagatatgtcagtattcatagatcaatgg
gtgagaacgggagggcatgcaaaattcagtctaagttttatatttaatagaaaaagaaat
acagtggagttagaaattagacaagatactacacatcaaagagggattagaaaatatgtg
ggtccattagtggttaatattcaagaattggatggtacttttaaacacacattacaaatt
gagggtacaatggctagagcggatatcacatgccacagtaaaagtcgtagaaacaagaaa
aagaaaattccattatgtactggcgaagaagttgatatggatctctctgctatggatgat
tctccagtattatggatcaggcttgatcctgaaatgactattatgcgcgctgtacaaatt
gaacaacctgattatcagtggcaatatcaattgagacatgagagagatgttactgcacaa
ttagaagcaattgaagctttacagcatcatccaacaccacccacacgattagccttgact
gatacaattgaaaatgaacattgttattataaagtcagacttcgcgctgctcattgtttg
acaaaggtaggaaacgctatggtagcaacatggtcaggcccgccagcaatgttggccata
tttagaaaattatttggatctgcatcatgccggcgaattattaaacaaaacaatttctca
aattttcaacattattttctacaaaagactataccagttgcaatggcaggattacgcaat
gctcatggtatttgtccacaagaagtattagctttcttaatggatctttttaaatataac
gataatagtaaaaacagatattccgacaattattacagagctgcgctaatagaagctcta
ggcgcaactgttacaccagtcatcagtgtacaacaaggaacggctattacagcagagtct
ttatcaattgacacaaaggctattctagaagaagtaacaagaaacttaaacctagagaaa
ttattaccttgctacaaatacaccgtcagtgtagcttgtctcaaagttatacgcatcctt
caaaaatttggccatcttccaagcaatcctcatctctttagagcatatgcagcatatgga
cagtttatagatgttagaattgcagctttagaagcgttggttgattttactcgcgtagac
ggcaaatgggaagatctggaatttttattagatatggcagaaatggacccgcatcctggt
gtacgccataggctcgtacgattaatggtggaaaatccaccgttcgaaagagctcataaa
caccgcctagataaaccggatttagttgatcgtatatggaatttgataaatggcatgtta
tcacacgatgcaaaattacgttgcgatttggtggatttatactacactttatatggtaca
aaagttccattttgccttcccatccccgaaattgtggcgatcacaaaacctaaaaaagct
ggtccgccaactccggaacgcgaagtgaaagctgcacccgtacaatacgtaaagcacgaa
tcgatcgaagaagttgaaagcctacctgtctcaaataagaggaaagcatctccaaacagg
gatcctccaggtccatcaaatccaggagtggaacatggaccggaattaaaacgacaaaaa
caggatgaacgaggaattccggtacctgctgaagggaaagttaaatccgaatattatagt
gataattccgcgtcattgcctggtattatgggcactcctccaggtccggtaggttttgaa
cctggaatgttcaaaaaggaatcagaagaacataaaccgaaaagtgattccagtaataag
agcaaaaagaaaaagaaggataagaaaaaacataagcataaacataagcataaacatgat
cacaaacacaataaagataaggaaaaaaaggaaaaggataagaataaggataaggagaag
gataaggataaggaaaaggaaaagggcaaggataaagattcgtccgccttaaaaattaag
gatgagactctcagctctgcaagttctagtcaaagcccagaaccaactgctaccaacgaa
ttccttttcccttag
DBGET
integrated database retrieval system
