Pogonomyrmex barbatus (red harvester ant): 105422829
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Entry
105422829 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase, mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pbar03029
]
105422829
Enzymes [BR:
pbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105422829
Mitochondrial biogenesis [BR:
pbar03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
105422829
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
SinI
EspB_PPE
Motif
Other DBs
NCBI-GeneID:
105422829
NCBI-ProteinID:
XP_011630661
UniProt:
A0A6I9VV28
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Position
Unknown
AA seq
1261 aa
AA seq
DB search
MFNFLRTRAVSTQNARIMSTGSTIQYQRQLCSFCNFHHLRPPRAMRCTPIRYYTTDIVEL
QTPNEKKIKRRSKKYAELLEVTNQTTSNKKAAVHKLSSAQVSVLVDQPNITLDKLHEIPN
FRLNKETITTQAIDINKKTMLKKNFLDDKSIDANAVLKKSDEQLDDTFAVIEDLKASGIN
DQITLIKDSSFLDMLQQIDTKDESQDDTYTQIPEYEDTASNSYANIPFTYETIDSENYFF
EENMVSKLLAHMDVYIQINMPHKAFKMLSMNKDQFKHSKVSTIALYNLLLKNHVTKVQVE
KSFELYRIIKADSVKPNSQTYALMFEIIGKMKNKEKKRESATEIIADMNYNGITFNEIIN
TSQINKTQTDTILQTIKSLDPQYRVYYKDINMAHKCNLLNNLTTNNNYQSPAKGVVTMEE
LRDMVDRQIRMEKQCKINVKNIVLFTGNPDVREQAVKRITEWEKIWKSTVTEAFERNLSY
LKQKETKLKIDLKILYPFLQVLPKKEYINAIMNEIEYLTKFSEGYSCTMTQLYLMLGLHI
YKKYEFQRKMKDNIIENSIQIYKEYLKWYMQMNPADRISNGRIKWQQLVQEAKKAGISCE
MTIPEWSQYTMINVGKFLYNIIVNDVKIPYASSPDAPERLIPAFYLLFRIHSNKYLMEEI
KPHPHIHRLYKDSHPESLPFNTISLPMYSPPRPWVDVNTGGYLFSKVIFARDPYMKSSRL
LKNTPTQQLYPVLDSLNQLGSIPWRINVPILDLLIQIFREGGSEKLNVPQPSSMASSLPE
MSVNKTNKENNTELAKMLFQLKRRKNEMHALWCDCLYKLSLANHFRDKTFWMPHNLDFRG
RAYPVPPHLTHLSSDLGRAILMFAQGKPLGPGGLDWLKIHAINMTGLKKREPMHKRLEFA
NEMLDLIIDSARNPLIGKMWWAEADEPWQTLAAFKEIDNALQSPNVEEYICRLPIHQDGS
CNGLQHYAALGRDVIGAKSVNLYPSDTPQDVYSVVANMVDEYRKTDAKAGNEVAKALEGN
VSRKVMKQTVMTTVYGVTKFGARLQIARQLSNLKDFDEKYIWGGSVYLTDKTFAALQNMF
GSAKEIQNWFIDCARAITTRCNQHIQWVTPLGLPVLQPYSKRNKIIFQKSKVPRKLDTMK
QKNAFAPNFIHSLDSSHMMLTSLYSEQAGITFMSVHDCFWTHPCTVDIMNKICREQFIAL
HSEPILENLSEFFCKKYDVKHIDNVRSVKRTTNVSLEVFKKVPKKGSFDINLILSSRYFF
S
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatttcctgaggacacgcgccgtctcgacgcagaatgcgcgtatcatgtcaacg
gggtcgaccatccaataccagaggcaattgtgctcgttctgcaattttcatcacctaaga
ccacctcgcgcaatgagatgtacgccgattcgctattacacgactgatatagttgaacta
caaactcctaatgaaaaaaaaatcaagcgtcgttcaaaaaaatatgcagaattattggaa
gtaacaaaccagacaaccagcaacaagaaggcagcagtgcataaattgagttccgctcaa
gtgtctgtcttggttgatcagcctaatattacactagacaaactgcatgagatccctaat
tttcgtcttaataaggagacaattacgacacaagcaatagatatcaataaaaaaactatg
ctcaaaaaaaattttcttgatgataagtcaatcgatgcaaatgctgtacttaagaaatct
gatgagcaattagatgacacatttgcagttatagaggatttaaaagcatctggaataaac
gatcagattacattgattaaggattcttccttcctggatatgttgcagcaaattgatacg
aaagatgaaagtcaggatgacacatatacgcagatacctgaatatgaagacacggcttca
aattcatatgccaatattccctttacatatgaaacaattgactcagagaattattttttt
gaagaaaacatggtgtctaaattattggcgcatatggacgtatatatacaaatcaatatg
ccacataaggcctttaagatgctcagtatgaataaagatcaatttaaacacagcaaagtt
tccactattgcactctataatctgttattaaaaaaccatgttactaaagtacaagtggaa
aagtcattcgaactctatagaataataaaagcagattctgtcaagccaaactctcaaacg
tacgctcttatgttcgaaataatcggcaaaatgaaaaataaggaaaagaaaagagaaagt
gcaacagaaattatagcagatatgaactataatggcatcacttttaacgaaataataaac
acatcgcagataaacaaaacgcaaactgataccattcttcagactatcaaatcattggat
ccgcaataccgtgtttattataaagacatcaacatggcgcacaaatgcaatttgctgaac
aatctaacaacgaataataattatcagagcccggcgaagggagtagtaactatggaagag
ctgcgggatatggtagataggcagattagaatggagaagcagtgcaagataaatgtgaaa
aatattgtactgtttactgggaatcctgatgttagagagcaagctgtcaaacggatcacg
gaatgggagaagatctggaaatcaactgtgactgaggcttttgagagaaatttatcttat
ctcaaacagaaagaaacaaaattgaaaatcgatttaaaaatcttatatccgtttctgcaa
gtgctacccaaaaaagaatacattaatgcgatcatgaacgaaattgagtatttgactaaa
ttttccgaggggtacagttgtaccatgacacaactttatctaatgctgggactgcatatt
tataaaaaatatgaatttcagcgaaaaatgaaggataatatcatagaaaattcgattcaa
atttataaagaatatttgaagtggtacatgcagatgaatcccgctgatagaatcagcaat
gggcgtattaaatggcaacagctggttcaggaagcaaaaaaggctggcatctcttgcgaa
atgactataccggagtggtctcaatatactatgataaatgttggcaaattcttatataat
atcattgtgaatgacgtgaaaatcccatatgcctccagtcccgacgcacctgaacggctc
atacctgcgttttatctgctattcagaatccattctaataaatatttaatggaggaaatt
aaaccgcatcctcacatacacaggctctataaagattcacacccagagtcgttacccttc
aatacgatctctttgccgatgtattccccaccgcgtccttgggtcgatgtaaataccggt
ggttatctgttttccaaagtgatattcgctcgtgatccctatatgaaatcatcacgtctg
ttgaagaacacgccgacacaacagctgtatccagtgctcgactccttgaatcaactcggt
tcaattccttggaggatcaacgtgcctatattggatctcttgattcaaatctttcgagag
ggaggctcggagaaattgaacgtacctcaaccgtcctctatggcgtcgtcgttgcccgag
atgtctgtgaacaaaacaaacaaggaaaataatacagaattagcgaaaatgctgtttcaa
cttaaacgtagaaagaacgagatgcatgcgctatggtgtgactgcctctacaaattgtcc
ctcgccaatcatttcagagacaagacattctggatgccacacaatttggattttagaggt
agagcatacccggtgccacctcatttaactcatctcagttcggatttaggccgcgcgatc
ctcatgtttgcacaggggaagcccttgggacctggaggtctggattggttaaaaattcac
gccataaatatgaccggtttgaagaagcgggaaccgatgcataaacgattggaattcgca
aatgagatgttagatctgatcatcgacagcgcgagaaatccattgattggaaaaatgtgg
tgggctgaagccgacgaaccgtggcaaactttggcggcgttcaaggagatagataatgct
ctacaatccccgaatgtggaggagtacatatgccggcttcccattcaccaagatggtagc
tgcaacggattgcagcattatgccgcgctcggaagagatgtgataggagcgaaaagcgtg
aacttgtatccttcggacactccacaggatgtatacagcgttgttgctaatatggtcgac
gaatacaggaagacggacgcgaaggctggcaatgaagtagctaaggccttagagggaaac
gtcagtaggaaggtcatgaaacaaactgtaatgaccaccgtgtatggtgtgacaaaattc
ggtgctagactacagatcgccagacagctcagtaatctgaaggattttgatgaaaaatat
atttggggcggcagcgtgtacctgactgataaaacattcgcagcccttcagaacatgttt
gggagcgcgaaggagatacagaattggttcatcgattgtgctcgcgcgatcacgaccaga
tgcaaccagcatatacagtgggtgacgccgttgggtcttccggttttacaaccctattcc
aaacggaataagattatttttcagaaaagtaaggttcccaggaagctggatactatgaaa
caaaagaatgccttcgcgccgaattttattcattcgttagactcatctcatatgatgttg
acgagtttgtattccgaacaagcgggcattacgtttatgtcagtgcacgattgtttctgg
actcatccgtgcacagtggatatcatgaacaagatttgccgggaacaattcatcgcgctg
catagcgagcctattctcgagaatttgtccgagttcttctgcaagaagtatgatgtaaaa
cacatagacaacgtacggtccgtaaagcggacgaccaatgtctcgctagaagtcttcaag
aaggtgccgaagaagggtagtttcgatatcaacctaatcctatcgtctcgatactttttt
agttaa
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