Pogonomyrmex barbatus (red harvester ant): 105422878
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Entry
105422878 CDS
T04903
Name
(RefSeq) uncharacterized protein LOC105422878
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pbar04121
]
105422878
Enzymes [BR:
pbar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
105422878
Ubiquitin system [BR:
pbar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
105422878
Multi subunit type E3
LUBAC complex
105422878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
ubiquitin
zf-RING_5
zf-RING_2
IBR
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Enolase_N
DUF1090
Motif
Other DBs
NCBI-GeneID:
105422878
NCBI-ProteinID:
XP_011630739
UniProt:
A0A6I9VPV3
LinkDB
All DBs
Position
Unknown
AA seq
1465 aa
AA seq
DB search
MVQRAACSNETNASLNGVPNGDREGGTSGVVATDAVIAHGAVDGESTSLTRSGGGRFSLF
RWFKRNRDSTVEKRRKTSARPDDDGVVRRRSSVYSSVESVDTFYSTTTVRSFAFHTGTLG
RCNVLSLDILKQAAEVGPFAAGASKAYLGNKENNAVACTLPINVHSRRRDITTRYSLQPS
TNFSSCGNFLTTEKNSSDSSRRFNENARTNCNGSVRRRVHVKGKRRAPNPPAAVVNVVEV
DVRETPARNSNRRKRRAPRPPEKASTAEQSKLVTNGDKMEIEKRKNIDERQSISNDTLIL
QGGMLLSKKEVCGSPKAAKKNDNETRTSSVTVLQERAQSPIGTLNAMPRPWYKRSVFENS
RDPGTSKRGAVFRSPVVSTEMKDECIGMNINSSPSYSIDASLSRFFHRGERQSDDRKRQE
AKRKSGLSILTNISELDKEAAAIVQEEQARTRASMMLKASKFADEFERRNEVNEELVQDI
VTSAIESSSPRRGTRALISKFNAISNITKVTVNASFFAKRDQPGYKLDRETVRNSRFEQA
GDWRNQRFSVQQDLGQSVRVDKDISRYFLPQQRSSRNITEPTHADVKSVDVKITSNKEQN
DQLMKDTSSRISLLQSQLAANRANESLTTQKDIAFPEEKNRSRQEIAKEIKGKESPRLNN
ETRRDFLLSRARNLAESTENALDPFRENADGMQREFSDIFDEIDRQLHTREFKLVERRPV
AESVRGKVSEDEALSSKVAKILDILVEAEKDSKTRPTVQSERSMQDKETSRLIDSDQKMK
PSKTKLTALNTVEDPITTDLKEMVKEMKRSLPKRPKSKKTISNDDDVLEKVEKRSPVPAN
KISYIGSVMATRPVTSSNDYETDKQKVSSSAQTSGNIRRLNQPSTSAERPSTSGWKHENV
LYRTSGKGSVLVKNTFQLIRPRDFAEIEAMKTTKEIYKENTYANVIEPSLYANAHVPPIS
PKQRPDPTRSKAIPQNSHAEKSPNIANENKIMSNDDELVDEDDNSTARNMNTLAINRLLR
KLEGAIASGHHQQAAGLAKELARLKIHCSVIRQRSAARLKDQSIKVNMYIEDKLAHQGPI
PLQLPTRMTVAELKTKIHTEFEIPTNVQRWIIGKNLADRDETTLDELNAVDGLPVFLYLV
APELHVDNATQANKPEVPETEKVPEELPQDPPMEILETIEEKQEIKETDKIILTTDEHQQ
EVTETDTTEDVKIRRYEELISLENWDVIPNSESIECPICFVTYGPREGVILRDCLHMFCR
QCIANTIAYCEEAEVKCPYRDPDYTCESTLQEREIKALVEPEVYQQHLAKSIAQAENNAG
NKAFHCKTPDCPGWCIYDDDVNNFLCPVCGANNCLNCQVVHTGKNCKQYQQELLFSKETD
QESRRTAAMLKEMVDRGEALACPTCAVVLMKKWGCDWLVCSMCKTEICWVTRGPRWGPGG
KGDTSGGCRCGENGVKCHPRCNYCH
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggtacagcgagccgcgtgtagcaacgagacgaacgcatccctcaatggcgtaccgaac
ggcgaccgcgaaggaggaacatccggtgtggtagcaacggatgcggtgatagcgcatggt
gctgttgacggcgaatcgacttccttgacacgcagtggcggcggtaggttctccctgttc
aggtggttcaagcgaaatcgcgattcaaccgtggagaaacgacggaaaacgagcgcgagg
ccggacgacgatggcgtcgtccgacgacgcagcagcgtctattccagcgtggagagcgta
gacaccttttacagcaccactacggtccgcagttttgcgtttcacacgggaaccctgggt
cgttgcaacgtactgtctctggacattctcaagcaagcagccgaggtcggcccgtttgcc
gctggagcttcgaaggcgtatctaggtaacaaagagaacaacgccgttgcctgcacattg
ccgattaatgtacactccagaagacgagacatcaccaccaggtattcgttgcaaccgtcg
acgaatttcagctcgtgcgggaacttcctgacaaccgaaaagaattcatcggattcatcg
agaagattcaatgaaaatgcgagaaccaattgcaatggatctgtgcggcgacgggttcat
gtaaagggaaaacggagagcacccaatcctcccgccgcggtagtcaatgtcgtggaggtc
gatgtacgcgaaacacccgcgaggaatagcaatagacgaaaacgacgggcgccgcgacct
cctgaaaaagcttcaaccgcggagcaatcgaagctcgtcaccaatggcgacaagatggaa
atagagaaacggaagaatatcgatgagagacaatctatcagcaatgacacgctaattctt
cagggtggtatgctgctgtcgaagaaggaagtctgcggtagtccaaaggccgcgaaaaag
aacgataacgagacgagaacatccagcgtgacggtccttcaggaaagagcgcagagtccc
attggcactttgaacgccatgccacgaccttggtacaaacgtagcgtcttcgagaactct
cgcgatcctggaacgtccaaaagaggcgccgtctttcgcagtcctgtggtatccaccgaa
atgaaggatgaatgcatcggaatgaacataaattcttccccgagttattccatcgatgct
tctctgtcaaggtttttccatcgcggtgaacggcagagcgacgacaggaaacgacaggag
gctaaacgaaagtctggcttatccattctgacgaacatcagcgagctggacaaagaagcc
gcagcgatcgtgcaagaggagcaggcgcgaacgcgggcgtcgatgatgctaaaggcgtca
aaatttgccgatgaatttgagaggagaaatgaagttaacgaggaactcgttcaggacatc
gttacctcggcgattgagagctcatcgcccagaagaggcacacgcgcgctgatttcaaaa
ttcaacgctatcagcaacatcactaaagtcacggtcaacgctagtttttttgctaaaaga
gatcagccaggttacaagctcgatcgtgaaacagtgagaaacagcagattcgaacaggcc
ggagactggaggaatcagagattctcggttcagcaggatctcggtcaaagcgttcgcgta
gataaagatatctctagatacttcttgccacagcagagatcatcaaggaatataaccgaa
ccgactcacgcggatgtaaagtcagtagacgtaaagattacttctaataaagagcagaac
gatcagctaatgaaggacacatctagcagaatatccttgttacaaagccagctcgctgcg
aatcgtgcgaacgagtctttaactacacaaaaggatattgcgtttccggaagaaaaaaat
agatcgcggcaagaaatcgccaaagaaataaagggcaaagaatcgccgagactgaacaac
gaaactagaagagattttttgctctctcgcgctcgtaatttagctgaaagcacagaaaac
gcattagatcccttcagagagaatgcggatgggatgcaaagggaattttcggacatcttc
gacgaaatcgaccgacaactgcatactagagagtttaaactcgtcgaacggagaccagta
gccgaatctgtcagaggcaaagtttcggaggatgaagccctatcaagcaaagtggctaaa
atactcgatattctggtggaagctgagaaggatagtaaaacaagaccgacagtgcagtcg
gaaagatcgatgcaagacaaggaaacatcccgtttgattgattcagaccagaagatgaag
cccagtaagacaaaattaaccgctctcaatactgtcgaggatccaattacgacggatttg
aaggagatggtgaaggagatgaagcgctcgttaccgaaacgacccaagtcgaagaagact
atatcgaacgatgatgacgttctcgaaaaggttgagaagcgttcacctgtacctgcgaac
aagatctcttacattggttcggtcatggcgacaaggccggtaacatcgtccaatgattac
gagacagataagcaaaaggtgtcctcgtcagcgcaaaccagtggaaacatccgtagatta
aatcagccttctacgtccgccgaacgaccatctacatctggatggaaacacgagaacgtg
ctctacagaacttctggcaagggttcggtccttgtgaaaaatactttccaactgatacga
ccacgcgatttcgccgagatagaagctatgaagaccacgaaggagatatacaaggaaaac
acttatgccaatgtgatagaaccgtcgctgtatgccaatgctcacgtacctcccatatcg
ccgaaacaacggccggatccgacgcgatctaaggctattccgcaaaatagccacgctgaa
aagtcgcccaatattgcaaacgagaataaaatcatgtcgaacgacgacgagcttgtagat
gaagacgataattcaacagcgaggaacatgaatactctggccataaatcgattactaaga
aaactggaaggggctatcgcgtcgggtcatcatcagcaagcggcaggattagcgaaggaa
ttggcaagactcaaaatccattgttccgtgatacgacagcgttcggcggcgcgtttgaag
gatcagtcgattaaagtcaatatgtatatcgaagacaaactcgcccaccaagggcccata
ccacttcagctgccgacgagaatgacggtagccgagctgaagacaaagatacatacggag
tttgagatacctacgaacgtgcaacgatggatcatcgggaaaaacttggctgatcgcgac
gaaaccactctcgacgaattaaatgcggtggatggtttaccagtgttcctttatcttgta
gcacccgaattgcacgtcgataatgcaacgcaagcgaataagccagaagttcccgagaca
gagaaagttcctgaggaattgccgcaagatccaccaatggaaatcttagagacaatcgaa
gaaaagcaggaaattaaggaaacggataaaataatattaacaacagacgagcatcagcaa
gaagtaacggagacagacacgacggaagacgtcaagataagacgatacgaggaactgata
tcgttggagaactgggatgtcattccgaattctgaatcaatcgagtgtccaatatgcttc
gttacatatggtccgcgcgaaggtgtaattctgagggattgtttacatatgttctgcaga
caatgtattgccaatacaatcgcatattgtgaagaagcggaagtgaaatgtccatacaga
gaccccgactatacgtgtgaatcgactcttcaagaacgtgagatcaaggcgctcgtcgag
ccggaagtttatcagcagcatctcgcaaagtcgatcgcacaagcggagaacaatgccgga
aataaggctttccattgcaagacaccggactgtcctggttggtgcatttacgacgacgat
gtgaacaatttcttatgtcctgtatgcggagctaataattgtcttaactgtcaggtcgtt
cataccgggaagaactgtaaacaatatcagcaagaattgctgttttcaaaagaaactgat
caagaatctagaaggacagcagcaatgcttaaagagatggtcgatagaggagaggcactt
gcgtgtcccacgtgtgccgtcgtccttatgaagaagtggggctgcgactggctggtttgc
tccatgtgcaaaacggagatatgttgggtaaccagaggaccgcgttggggcccaggaggt
aaaggggacacatctggtggttgcagatgtggtgagaacggagtcaagtgtcatcctcgt
tgcaattactgccattaa
DBGET
integrated database retrieval system
