Pogonomyrmex barbatus (red harvester ant): 105422895
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Entry
105422895 CDS
T04903
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbar03400
]
105422895
DNA repair and recombination proteins [BR:
pbar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
105422895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
CCDC89
SMC_hinge
ABC_tran
AAA_27
Motif
Other DBs
NCBI-GeneID:
105422895
NCBI-ProteinID:
XP_011630757
UniProt:
A0A6I9VVA3
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MNDGMEKGVISHIYLENFVTYDKVTVKPGRYLNVIIGPNGSGKSTIVAAIVLGLGGKPNI
IGRALHIGEYVKYGCDSAKIEIHLKNNTRKDSIVTRIFTNDGKSTWLINGIQSSLKDVLQ
FTAKLNIQVDNLCQFLPQDKVQDFSKMDAQALLENTERSVGDPKLFEYHQKLKEQRANFK
KLEIDIINTKRLLDSKIQRRDGLQQTVMTIKERKLIKKKIVTLKQKKAWMLYDQIRRRLL
EVKKTRDTAIKEMQSIDTELKPLNKKIEKMKSDMTMLKSSLNDHNNKVYTKNTKLKNIMN
EILSCENKIKEAENTCSHKIQTEQSRDENVNLAQQQKCKLENDFALMINEIGSEENLTEQ
LRNIAINMEEHKQRVHNLTNKNVTLKYEDENIDREMRGIQAELQALNIDVKRLEVLKQRD
LHAYKAVLWLKENRDKFSAPVHLPMLLNINVKEASYAKYLENIIRFRDLIAFTCENKQDM
NLLLKYLRDQQKLQVNVLHSDPMKRISMQPHIPIENIKKFGFKHYLSELIEVPPSIMKYL
ISMYRLNNIPIGTKEVENNTNHIPRNLSCYFSENNIYSVNTSKYTREISVRISRITGNGM
LSIVLDKLKLQKLQERLQNLQEKKSQILIQIKEIEDKIREETKVLDEYRINRNKYQQNIQ
HIQTLKSRIHVAADKIKQMEMGRTSIDDIKAACTNEIKAVIMKQLKMYKEYNTVLKECFN
CNTSNVEIKFAITLLQQTLTAKENDVEELNDKFTTAEEIFKQHDEEFQSLKRETERLYKE
ALEITNQISPQDNAFKSLNKAFEKLPATIAEINNELNIAQAKVFCMAKNIDAENILREYE
EMQNNIQKLTDFVKNKTIVLEKMKTEIEELKEKWLRPLEQLIEKINTNFSAYFSAMDCAG
EVTLSHGENILDFDQYGLKIKVKFRDADELQELTRHFQSGGERTVTTAIYMIALQELSLV
PFRCVDEINQGMDAVNERRVFNLLVKMTGRPRSSQYFLLTPKLLPDLSYAETVTVHCVFN
GSVNTDEEKFDFDIEDYCNHLALSTN
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacggcatggaaaaaggagtcatctcccacatatatttggagaattttgtgact
tatgacaaagtcactgtgaaacctggaagatatctcaatgtcatcattgggccaaatggt
tctggcaagtccaccattgttgctgctatagttctcggtctaggaggtaaaccaaatatc
attggtcgggcacttcatattggagaatatgtaaaatatggatgtgattcagcaaaaatt
gaaattcatctaaagaacaacactaggaaagattccatagtaactagaatttttactaat
gatggaaagtccacatggcttataaatggtattcagtcaagtttaaaagatgtactacaa
tttacagctaaactaaatattcaggttgacaatttatgtcaatttctaccacaagataaa
gtacaagatttttcaaaaatggatgctcaagcattgttagagaacacagaaagatctgtt
ggagatccaaaacttttcgaatatcaccaaaaattgaaagaacaaagagctaatttcaag
aaactagaaattgatataattaatacgaaacgattattagattcaaaaattcaaaggcgt
gatggattgcaacagactgttatgacaataaaagaaagaaagttgataaagaaaaagatt
gtaactttaaaacaaaaaaaagcatggatgctatatgatcaaatacgtagaagattacta
gaagtcaaaaaaactagagatacggcaataaaagaaatgcaatcaatagacacagaatta
aaaccattaaataaaaagattgaaaaaatgaaatctgatatgacaatgttaaaaagttcc
ttaaatgatcataacaataaagtctatactaagaatacaaagttgaagaatatcatgaac
gagattctcagttgtgaaaataaaattaaagaagctgagaatacttgttcacacaagatc
caaaccgaacagagtcgagatgagaatgtcaatcttgcgcaacagcagaagtgcaaactc
gagaacgattttgcactcatgattaatgaaattggatcagaggaaaacttaactgaacaa
ttgagaaatatagcaattaatatggaggagcataaacaaagagttcataatctcacaaac
aaaaatgttacattaaaatatgaagatgaaaacattgaccgtgaaatgagaggtatacaa
gcggaacttcaagcattgaatatcgatgtgaaacgtttagaagtattgaagcaacgagac
ctgcatgcatataaagctgtactttggttaaaagagaatcgagataaattttcagcacca
gttcatttacccatgttgctcaatattaatgtaaaagaggcttcgtacgccaaatattta
gaaaatataatacgatttcgagatttaattgcatttacatgcgaaaataaacaggatatg
aatctgctactaaaatatttgagggatcaacaaaaattgcaagttaatgtattacattct
gatccaatgaaaagaatttctatgcaaccacatataccaatagaaaacatcaaaaagttt
ggcttcaaacattatttgtcagaacttattgaagtgccgccttccataatgaaatattta
atctcgatgtatcgcttaaataatattcctattggaactaaagaagtcgagaacaataca
aaccatatacctcgcaatttaagttgttacttcagtgaaaacaatatttactctgtgaat
acatctaaatatacacgtgaaatatcagttagaatatcacggatcactggaaatgggatg
ttatctattgttttagataagttgaaactccagaagcttcaagaacgattacaaaattta
caagaaaagaaaagtcaaattttaattcaaattaaagaaatagaagataaaatacgcgag
gaaactaaagtgttagatgaatatcggatcaacagaaataaatatcaacaaaatatccag
cacattcaaacattaaaaagtagaatacacgtagctgcagataaaatcaaacagatggaa
atgggtcgaacgagtattgatgatataaaagcagcgtgcaccaacgagattaaggctgtt
ataatgaaacaattaaaaatgtacaaagaatataatacagttctaaaagaatgtttcaac
tgtaatacgagtaatgtagaaataaaatttgcaataacgttactacaacagactttaaca
gctaaagaaaacgatgtcgaagaattaaatgataaatttacaacagcggaggagatattt
aaacaacatgatgaagaatttcagtccttaaagagagaaactgaaaggttatataaagaa
gcattagaaattacgaatcagattagtccacaagataatgcatttaaatctctgaataaa
gcttttgaaaaattacccgctactatagctgaaataaataacgagttgaatattgctcaa
gcaaaagttttttgtatggcgaaaaacatagatgccgaaaatatattacgtgaatatgaa
gaaatgcaaaataatattcagaaattaacagattttgtcaaaaataagactattgtacta
gaaaaaatgaaaacagagattgaagaattaaaagaaaagtggttgcgaccgttggagcaa
ctgattgaaaagataaacacaaatttcagcgcttatttctccgcgatggactgtgctgga
gaagttacactttcgcatggtgaaaacatcctggattttgatcagtatggtttaaagatt
aaagtaaaattccgagatgcagatgaactgcaagaattaacgagacattttcagagtggt
ggcgaaagaaccgtaactaccgctatttatatgatagcattgcaagaattatcacttgta
ccatttcgctgtgtggatgaaattaatcagggcatggatgcagtgaacgaaaggcgagtc
tttaatttactcgtcaaaatgacaggaaggccaagaagctcccaatactttttgctcaca
cccaaacttttgcctgatttatcgtatgccgagacagtgacggtccattgtgtctttaat
ggatcagttaacacggatgaagaaaaatttgatttcgatatagaggactattgcaatcat
cttgcgttgtcaactaattga
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