Pogonomyrmex barbatus (red harvester ant): 105423360
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Entry
105423360 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbar03009
]
105423360
Enzymes [BR:
pbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105423360
Ribosome biogenesis [BR:
pbar03009
]
Eukaryotic type
90S particles
Helicases
105423360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
HEM4
Motif
Other DBs
NCBI-GeneID:
105423360
NCBI-ProteinID:
XP_011631388
UniProt:
A0A6I9WI59
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MDAHDLFKKLAAGAKFDTKRFRQDAERFQMVRPNKXNIDIKVEKVTDEILEPNIEHNAKR
KYKDENKNINEITLLDGFSVPKDENVPAKKRKKVATADKMLKLEQEKINHLRNMNRISVT
GSHVPKLILDFDELRTNYQVPENLLNNMKNSGYIYPTPIQMQAMPVMLEGRQILACAPTG
SGKTAAFLLPIIHHLRGPQKKGFRAIILSPTRELAKQTYRECLRLSDGCDFRIHIISKAN
QALTKYGPSSSQKFDILITTPKRLVFLLNQDPPAISLNNVEWLIVDEADKLFEEGIRGFR
EQLDEITKACVNKDLRRGMFSATNTPTVSKWCRRNMKGLVTITVGQRNAAADLVDQKLLF
VGSERGKLVEFRNIIQKGISPPVLVFVQSKERAQELFNELIYDGINVDVIHADRTMTQRD
NTVRCFREGKIWVLICTELMGRGIDFKGVNLVINYDFPPSAISYIHRIGRTGRAGHKGQA
ITFFTQQDTVNLRSIAAVMRASGCNVPDYMLAMKKXSKKERRKLERTAPAREKILTVPTY
KRRKQKSREKFVLKEEM
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcacgatcttttcaagaaactcgcagccggcgcaaaatttgatacaaaacgt
tttcgacaagatgcagaaagatttcagatggtgaggccaaataaanaaaacatagatatc
aaggtagaaaaagtaacagatgaaatattagagcctaacatagagcataatgcgaaaaga
aaatataaagatgaaaataaaaatattaacgaaataacattactggatggattctcagta
ccaaaggatgaaaatgttccagctaaaaaacgtaaaaaagtcgcgactgctgacaagatg
ttgaaactggaacaagagaagataaatcatttgagaaatatgaatcgtatttcagtcaca
ggcagtcacgtacctaaattaatactagattttgatgaattgaggacaaattatcaagta
ccagaaaatttgttgaataatatgaaaaatagtggatacatatatccaacaccaatacag
atgcaagcaatgccagttatgttggaaggtaggcagatactggcttgtgctccaacagga
tcagggaaaactgcagcatttttattacctattattcatcatttacgtggaccacaaaag
aaaggttttcgtgctattattctaagtcccacgagggagttagccaaacagacatataga
gaatgtctaagactgagtgatggctgtgactttagaattcatataattagcaaagcgaat
caggctcttactaaatatggaccctcaagctcgcaaaaatttgatattttaattactaca
ccaaagcgattagtctttcttctaaatcaagatcctccagccatttcattgaataatgtt
gaatggttgatcgtggacgaagcagataaactttttgaagaaggaatacgcggttttagg
gagcaattagatgagattacgaaagcctgcgttaataaagatttacgtcgtggtatgttt
agtgcaacgaacactccaacggtatcaaagtggtgtcgtcgtaacatgaaaggtcttgta
acaataacagttggacaaaggaacgcagctgcagatttggtagatcaaaagcttctattt
gttggtagtgaaagaggtaaattagtggaattcagaaacattattcagaagggcatatca
ccaccggtcttagtatttgtgcaaagcaaagaaagagctcaggagcttttcaatgagctt
atttacgatgggattaacgtggatgttattcacgccgacagaacaatgacacagcgagac
aataccgtgcgttgcttccgagaaggaaagatctgggtcttgatctgtacagagctgatg
ggcagaggtatagattttaaaggcgtaaatctcgttataaattatgattttccaccatcc
gctatctcctacattcacagaataggtcgtaccggtcgcgctgggcacaaaggacaagca
ataacgttcttcacgcaacaggatacagtaaatttacggagcattgcggcggttatgcgc
gcgtcaggatgcaatgtaccggattatatgttggctatgaaaaaanncagtaagaaggaa
cgacgaaagcttgagcgtacagcacccgcacgcgaaaagatattaaccgtgcccacgtat
aaacgacgtaagcagaaatcacgtgaaaagttcgtattaaaagaagaaatgtaa
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