Pogonomyrmex barbatus (red harvester ant): 105423663
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Entry
105423663 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03013
Nucleocytoplasmic transport
pbar03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105423663
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
105423663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbar03019
]
105423663
Messenger RNA biogenesis [BR:
pbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105423663
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RanBP
DUF7129
Motif
Other DBs
NCBI-GeneID:
105423663
NCBI-ProteinID:
XP_011631805
UniProt:
A0A6I9W0D2
LinkDB
All DBs
Position
Unknown
AA seq
1555 aa
AA seq
DB search
MPKEGGNPAGRRPSSRTAKPYDANNSFVKKMATKVTDFIPQPSWISKWFITSQNNEDTPE
GRGNIEETEFDDDVHQPPTKRSRIRMDVIHPPGTFSIQTRVKTALNTIEPSKEQYPVHEV
TEDFLEPATAGPSGIGRLISSTPAVQADIRAVTSHRSDLNSLASSTNNGIANGMDDNSES
SESTSGCSSLIPQINRHEGPSNLLYSSAFTSRKRHDDKLTFTNHLQSSRSLFLDSSRDSL
SSRRPSFNASIITNATDRASPLSSPFYNGNITFGGANAAGLYKRNRNIFNNSNEIQLKVP
RRTNVEVKPSDSVGVDSSGMSQTAKRILEALEHFSSPVSDAKKIPLKNTNNVSVSSASSV
TSRKRAREEVATPSARIGLRHLTRELTVPTVPDILKLRRRQKLQDTTLMARKIVSARSDP
PPPPQEYRLRTEDTDNEKYRGKLKGKSKINLEQEETVTPVNLPNIPLPITTLPNFNFTLP
PPAAHSAGKTAANKENTFTFASPIKVTDVGKNLQSVNNFTFSNPINAEDCASTIDSRSMT
ENEFTVDCAITSIPNFIWSGSSTAPRLKAKVKSSRDDSVETTVPQELKSKSVMDVFKSNK
MESKIGQSNSELDSKTTDTIKTASTNVNLNPDVTSTHDTESSWECSECMIRNDSTNKQCT
ACKIARSNPNKTSLPSTSTIDTIVETKPVTQDCFGSQFKLSTNQWECTTCCIRNKQSDVT
CIACTTPKPGSNATVQQTVKSQNFDLMKKFKPAEGSWECSGCLLRNAANMITCPCCNTSK
PTTSVKTSKKTNSVTESFAQQLSTNTVVTGTQEKTSNNSELMNKFKPNKDSWECPGCFVR
NNNSIITCPCCSTAKPNSAEGSSKAEQTSTNGFGDKFKKPEGAWTCDSCLLQNDAKHTEC
VACQASKPGIVKSSESSSNSGSTLQFKFGVPSSTANLTSQSSGFKFGIDKTDTQTKSDSS
PLNGFKFGNTQQNSDTAQFTFGVPKEENKAVSEASKTNNVTSSSGTEFQFNVKNSEKLES
KEDQENKQETLFGMPKSESLTTANEKQTSNIASSTSLTASSFTFGMQKSGFNQPASNKET
QNTSFATTVTESSKPSATIDAVIIPISTNTTLPSLSTEKNITKNVSEIKPESIFSFGVPS
STSAVTTTSTNATTTCLPTFAQPTFTFSDSKNQPATLPSFGQIPPSSVPLSTNVSFGGNK
ASEITPSSNKPATNDPPVATLFPIVSSSTPLFNNESKTTIAFGTDKSFTTTSSKPSGFAM
PENKIPTFGSNTESKPPIFGTSETKLPVFNPPAANPLPTFGTPSTSATPSLFGSSSTPAF
GNNTTPVFGGTSTTPTIFSTTKPNETNTASNSSLFTFGSASSQQSTSGRFNFSANVNPAA
PATAKPLFTFGSNSSAPPSGNNTFGSGTFGVNSAPIANTANFTFNPSKQETSATFGQGAV
ASPIFGTPQANPQTQATSSFSSTPSSTTGFNFGSTAPVAATSGGFNFGGMSSTSASTGGF
NFNPTPTSTPTVAFDPNSRPSFNFTKGSVPTAFNAPPQSAQAPRKIKKAFRRCVR
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaggaaggcggtaatccggccggcaggcggccgtcgtcgcgtaccgcgaagccc
tacgacgcgaacaactcatttgtaaaaaaaatggcaaccaaggtaacagattttataccg
caaccatcatggattagtaagtggttcattacctctcaaaataatgaagatacgccagaa
ggtagagggaatatcgaagaaacagaattcgatgatgatgtacatcagcctcctaccaag
cgatcgcgtatccgtatggatgtgattcatccacctggcacattttctatacaaacgaga
gttaaaaccgcattaaatacaattgaaccttctaaagagcagtatcctgttcatgaagtg
acggaagattttctggaacctgctacagctgggccaagtgggataggtcgtttaatatct
tcaacacctgcagtacaagcagatattagggctgtaacgtctcacaggtctgacttaaat
tccttagcttcatcgaccaataatgggattgcaaatgggatggatgataattcagaatcc
agtgaaagtactagtggatgcagttcacttattccacagataaataggcacgaaggcccg
tcaaatttattgtatagttcggcatttactagtagaaagaggcatgatgacaaattaaca
tttactaatcatttacaaagttcgaggtctttatttttagatagttctcgcgattcttta
agtagtcgtagaccgagttttaacgcatcaattattacaaacgctacagaccgcgcatct
ccgctgtcctcccctttttataatggtaatattacctttgggggtgcaaatgcggcggga
ctttataaacgaaatcgtaatatttttaacaattcaaatgagatacaacttaaggtacca
agaaggacgaatgttgaagttaaaccttctgattcagtgggagttgattcatctggtatg
agtcaaactgccaaaagaatattggaggcattagaacatttctcatcacctgtatctgat
gcaaaaaaaataccattgaaaaatacaaataatgtctcagtatcctcagcatcttcagta
acaagcagaaaaagagcgcgagaagaggtagcaacgccatccgctagaatcggtttacgt
catttgacacgtgaattaacagtaccaactgttcccgatatactgaaattaaggagaaga
caaaaattgcaagatacaactcttatggctaggaagatcgtttctgctcgtagcgatcca
cctccgcccccacaagaatatcgattaaggacggaagatactgacaatgaaaaatatcgt
ggcaagttaaagggcaaatctaaaataaatctagaacaagaagaaacagtgacgcctgta
aatttgccaaatatacctctaccaataacgacattacccaatttcaatttcactttaccg
cctcctgcagctcattccgcaggcaaaactgcagcaaataaggaaaacactttcacgttt
gctagcccaattaaagtgacggatgttgggaaaaatttgcagtctgtcaacaatttcact
tttagtaatccaatcaacgccgaagactgcgcgagtacgatcgactcgcgttcaatgaca
gagaatgagtttactgttgattgcgcaatcacgtccataccaaatttcatttggtccggc
tcatccacagcaccaagattaaaagcgaaggtaaaaagcagcagggatgattccgtcgaa
accacagtgccacaggaactcaaatcgaaaagtgttatggatgtatttaagtctaataaa
atggaatctaaaattggacagtcaaactcggaattggattctaaaacgacagacactatc
aagactgccagcacaaatgtcaatctaaatcccgatgttacaagcacacatgatacagaa
tcatcttgggagtgtagtgaatgtatgattaggaacgacagtacgaataaacaatgcact
gcgtgtaaaattgctcgatcgaatcctaataaaacttcgttgccttcgacatcaacaata
gataccattgtggaaacaaaaccagttacacaagattgctttggttctcaatttaaactt
tctacaaatcaatgggaatgtacaacttgttgtataagaaataaacaaagtgatgttaca
tgtatagcatgtacgacaccaaagccaggaagtaatgctacggtgcaacaaactgttaaa
tctcaaaatttcgatctaatgaagaagttcaaacctgccgaaggatcatgggaatgttcc
ggttgtttattgagaaatgccgcgaacatgattacgtgtccttgttgtaatacatctaaa
cccactacttccgtaaaaacttcgaagaagacaaatagtgtcacagaatcatttgcacaa
cagttgagcactaatacagtagttacgggaacacaagaaaaaacatctaataattccgaa
ttaatgaacaaatttaaaccaaacaaagattcttgggaatgtccaggatgttttgttaga
aacaacaattctattattacctgtccttgctgtagtacggctaaacctaattctgcagag
gggtcgagcaaagcagaacaaacatcgactaatggctttggagataaatttaagaaaccg
gaaggtgcatggacttgcgattcgtgcttgttacaaaatgatgcgaaacatacagaatgt
gtggcttgtcaagcctcgaagcctggtattgtaaaatcaagtgaatcttcatcgaatagt
ggctctaccctgcaatttaagtttggtgtaccatctagtacagcaaatttaactagtcag
tcaagtggatttaagtttggcatagataagactgacactcaaactaaatccgattcatct
cctttaaacggattcaagtttggtaatacacaacagaatagtgatacagcacaatttaca
tttggtgttccgaaagaagaaaacaaagctgtaagtgaagcatctaaaaccaataatgtc
acatcttctagcggtacagaatttcaatttaatgtaaaaaattctgaaaaacttgaatct
aaagaggatcaagaaaataaacaggaaacgctttttggcatgccaaaaagtgaaagtttg
acaacggcaaatgagaaacagacttcaaatattgcgtctagcacttcactaaccgcttct
tctttcacgtttggtatgcagaaatcaggatttaatcagcctgcctcaaataaagaaacg
caaaatacttcctttgcaactactgtgacagaaagttctaaaccatcggcaacaattgat
gcagttattataccaattagcactaatacaacgttaccatctttatcaacagaaaaaaat
ataacaaaaaatgtgtctgagataaaaccggaatcgatattttcattcggggtaccaagc
agtacaagtgctgttactacaacttccacgaatgcaacgactacttgtcttccaactttt
gctcaacctacattcactttttccgattcaaagaatcagccagccacattaccatctttt
ggccagatacccccgtcgtctgtcccattgtccacgaacgtatcattcggaggaaacaag
gcatccgagattactccatcaagcaacaaaccagccaccaatgatccaccagtcgctacg
ctcttcccaattgtctcgagttccacaccgctatttaataacgagtcgaaaacgacgata
gcattcggcacggataaatcgtttactacaacaagcagcaaaccatcaggatttgccatg
cctgagaacaaaattccaacattcggcagtaacaccgaaagtaaaccaccaattttcggt
acgtcggaaaccaaattgccagtattcaatccacccgcggcaaatcctctaccaacgttc
ggtacaccgtccaccagtgccactccttcgctctttggatcatccagtaccccggctttc
ggaaacaataccacacccgttttcggcggcacctcgacaacaccaactatcttttcaacc
actaagccgaacgagaccaacactgcatcgaattcgtctttatttacgtttggctctgct
tcgtcgcaacaatcgacaagtggtagatttaatttttctgcaaacgttaatccagccgcg
cctgcaactgcaaagccgcttttcacatttggtagcaattcaagtgcaccaccaagtggt
aacaatacattcggtagtggtacattcggagttaattccgctccaattgcgaatactgca
aattttacgtttaatccatctaaacaagagacatcagcgacatttggtcaaggtgcagtg
gcaagtccgatattcggtactccacaagcaaatccacagactcaagcaacgtcatcgttc
tcatccactccttcgtccaccacaggattcaattttggatccacggctccagttgctgca
acgtcaggaggttttaactttggaggaatgtcatctacatctgcatcaaccggaggattc
aattttaatcctactcccacttctactcccacagtagcttttgatcccaatagtcggcct
tcatttaacttcaccaaaggaagtgtaccaacagcattcaacgctccaccccaatcggca
caagcaccacgaaaaatcaaaaaggcatttcgaagatgcgtacggtag
DBGET
integrated database retrieval system
