Pogonomyrmex barbatus (red harvester ant): 105423689
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Entry
105423689 CDS
T04903
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105423689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbar03021
]
105423689
Enzymes [BR:
pbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105423689
Transcription machinery [BR:
pbar03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
105423689
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
AcetDehyd-dimer
Ima1_N
Motif
Other DBs
NCBI-GeneID:
105423689
NCBI-ProteinID:
XP_011631844
UniProt:
A0A6I9VUU6
LinkDB
All DBs
Position
Unknown
AA seq
1399 aa
AA seq
DB search
MVKEQFRETNVASKVSHISFGVDSMHDMHMQASVEVISKNLYNEDAKHTPAVHGALDRRM
GVSSMGNECETCNKKLNECVGHFGYLDLQLPVFHIGYFRSIIQILQTICKRCAHVLLTLD
ERRFYSRKLQNPNLEYLACKALRKQIWEKAKKKTECPNCKANNGPVKKGGFLKIVHEQYK
NLKETDPFIQEKLAELSPATKRDKEYKNTVEQNYRCVFDQYLYPNVVQELFNRIPTGDMY
LLLMNPECSTPVDLILTRIPVPPICIRPSVLSDLKAGTNEDYLTTKLSELALINDVIRRQ
KGVTIQTYMEHWDFLQLHCGLYINSEMSGIPLHMQPKKFGRGIVQRLKGKQGRFRGNLSG
KRVDFTSRTVISPDPNLRIDQVGVPMYVAMTLTYPERVTPSNIELMRKLVRNGPDIHPGA
NFIQYKNSQDRRYLRYGDRKKVAQELQYGDIVERHLKDDDLVLFNRQPSLHKLSIMTHRT
KVLEHRTFRFNECVCTPYNSDFDGDEMNLHVPQTEEARAEALVLLANKSNLVTPRNGDLL
IAATQDFITGAYLLTQKDTFLQIEQVKLALCLLAGPDASIIVTLPLPAILKPTRLWTGKQ
IFSLIMRPNADCPVKANLKAKGKAYTTGEELCINDSYVIIRNSELLAGTMDKSVLGSGSK
QNIFYVLLRDWGEDVAATAMWRLTRLTNHYNFDRGISLGIGDLIPSQGLLRAKEKVLNTH
YSTCNEYIQLMEKGRLVCQPGCSEEETLETKILNELSVIRDNVGKACLKELHPSNTPLIM
ALCGSKGSFINISQMIACVGQQAINGRRVPNGFENRALPHVPARLRTPDAKGFVENSFYS
GLVSKEFYFHAMGGREGLTDTAVKTAETGYMQRRLIKSLEDLCIHYDMTVRNAMCNIIQI
PYGGDGLDPTYMEGKDCPVDYKRVYDHVRAKMPYRTEEPLDAASVINATNEMLSSEEYDC
LSNEFKQELTTFLKSVAWKIARYRQNIKSNSSVVSELERLTVSQLVEFIHTCKEKYMGAK
IEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVAAMNITQGVPRIKEIINASPKISTPIIT
AALVNDTDSEFAERVKARIEKTTLGDVAEYIEEIYMRDDHFLAIKLNIDRIKLLKLEIDV
NSVSYTLCTSKLKLTSKNLEIVGDSIIIIRPNRQKDNSNFPFRQLTEALPNIIVKGLSSI
NRVIVHNENLGGKTKFTLFVEGDNFREVMATPGILGEKTKSNNTIEVFKTLGIEAARTTI
MSEIKSVMENHGINIDRRHLMLLADLMTSRGEVLGITRQGLAKMKESVLNLASFEKTADH
LFDAAYYGQKDIICGVSESIIMGIPVPLGTGIFKLLHKADKDEPSKRELLFDNPQYHKPL
RSGRRLQRVRPRLTLQISP
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagaacagttcagggagacgaatgtcgccagcaaagtctctcacatttctttc
ggtgtggacagcatgcatgacatgcatatgcaggctagtgtagaggtgatctccaaaaac
ttatataacgaggatgcgaaacatactccagctgtgcatggagcacttgacagacgcatg
ggagtgagctctatgggaaatgaatgtgaaacatgcaataaaaagttgaatgagtgtgtg
ggacactttggatatctggatctacaacttccagtttttcacattggctattttagatca
attattcagattttacagactatttgcaaaagatgcgctcatgtcttgttaacactagat
gaaagaagattttattcacgcaaactacaaaatccgaatttagaatatctggcatgtaaa
gcattacgtaaacaaatctgggaaaaagcaaagaaaaaaacagaatgtccaaattgcaaa
gcaaacaatggtcctgtgaaaaagggtggttttctcaaaattgtacatgagcagtacaag
aatttaaaggaaactgatccttttatccaagagaaattggctgaattgagtccagcgaca
aaacgtgacaaagaatataagaatacagtagaacaaaactacagatgtgtatttgatcaa
tatttatatccaaatgtggttcaagaactctttaatagaatcccaacaggcgatatgtac
ctcttactaatgaatcctgaatgttcaacaccagtagatttgatattaacaagaatacct
gttccaccaatttgtattagacctagcgttttatctgacctaaaggctggtacaaatgaa
gattatctgacaacgaaattgtcagaattagcacttatcaatgacgttattcgtaggcaa
aaaggtgttactatacaaacgtacatggaacattgggattttctacaattgcattgtggt
ctttacattaatagtgaaatgtctggaatacccttacacatgcaacctaaaaaatttggt
agaggtatagtacaaagattaaagggaaaacaaggtcgtttccgaggtaatttatctggt
aaacgtgttgactttacttctcgtacagtaatttcgcctgatccaaatctcaggatagat
caagttggtgtacccatgtatgttgcgatgactttaacatatcctgaaagagtcactcct
tcaaatatagaactaatgcgaaaattggttagaaatggtccggatatacatcctggagca
aactttatacaatataagaactcccaagacaggcgatatctcagatatggcgatcgaaag
aaagttgctcaagagctgcagtatggtgacattgttgagagacatctcaaagatgatgat
ttagtgctgtttaatcgacaaccgtcgttgcataaattaagcattatgacacacagaact
aaggtattggaacatagaacatttagattcaacgagtgcgtctgtacaccatataattct
gattttgacggtgatgaaatgaacctgcacgtaccacaaactgaggaggctagagctgaa
gcgttggttttactagcaaacaaatctaatttggttacacctcgcaatggtgacttgttg
atagcagcaacgcaagatttcattacgggcgcttatctcttgactcagaaggacacattt
cttcaaatagagcaggttaaattagctctttgtctcttagcaggtccagacgcttctata
attgtaactcttcctctacctgcaatcctaaaaccaacaagattgtggacaggcaaacaa
atatttagtttgattatgcgaccgaatgcagactgtcctgtcaaagcaaatctgaaggca
aagggcaaggcatacaccaccggagaagaattatgtattaatgattcctatgttattatt
cgcaactccgagcttctagcgggaacaatggataagtctgtattgggctcgggatcaaaa
caaaatatattttatgttttgttgcgtgactggggagaggatgttgcggccacagctatg
tggcgtttaaccagactaacgaatcattataattttgatagaggaatttctctcggtatc
ggtgatctcatacctagtcagggtcttcttcgagccaaagaaaaagtgttaaacactcat
tattccacatgtaacgagtacatacaactaatggagaaaggtcgccttgtttgtcaacct
ggatgttcagaagaagaaacattggaaacaaagatattgaatgaattatcagtgattcgt
gacaacgttggtaaagcgtgtttgaaagaactacatcctagtaatactcctttaattatg
gcgctttgtgggagtaagggtagttttatcaacatctctcaaatgatcgcctgcgtaggt
caacaggctattaatggtcgtagagtaccgaacggattcgaaaatcgtgcattacctcat
gttccagcgcgtttacggactccggatgcaaaaggttttgtagaaaattcattttactcc
gggctcgtatctaaagaattctattttcatgcaatgggtggtagagaaggtcttacggat
actgctgtgaaaactgcagaaactggttacatgcagagacgattaatcaaaagtttagag
gatctatgtatccattacgatatgacagtacgcaatgcgatgtgtaatattattcagatt
ccatatggcggagatggattagatcctacgtatatggaaggtaaagattgtcctgtagat
tataaaagagtgtatgatcacgtaagagcgaaaatgccttacagaacagaagaaccgtta
gacgctgctagtgtaattaatgccacgaacgaaatgctctcctccgaggagtacgattgt
ctgagtaacgaatttaaacaggaactgaccacatttctaaaatctgttgcatggaaaata
gcacgttatcggcagaacatcaaatcgaattcgtcggtagtctcagaattggaacgtctc
actgtgtcacaattagttgaattcattcatacgtgcaaggaaaaatatatgggagccaag
atagaaccaggcacggctgtgggcgcactcgccgcgcaaagtatcggcgaaccagggact
caaatgacactcaagacgtttcacttcgctggtgtagccgctatgaatatcacacagggt
gtgccacgtatcaaagaaattattaacgcaagtccgaaaatcagtactcccattataaca
gcagcattggtcaatgacacagattctgagtttgccgagcgagtgaaggcaagaatcgag
aaaacgactctaggagatgtggctgaatatatcgaggaaatatatatgcgtgatgatcac
ttccttgcaataaaattaaatatcgatagaattaaattgttaaaattggaaattgatgtt
aattctgtatcctatactctctgtacttcaaaattgaaattaacatcaaagaatctagag
atagtaggcgattcaataattattattcgaccaaaccgacagaaagataattcgaatttt
ccatttcgtcaattgacggaagctcttccaaatatcatagtgaagggcttgtcatcaatc
aacagagtgattgtacataatgaaaatcttggtggtaaaacgaaatttacgttatttgtt
gaaggagataattttagagaagttatggcaacacctggcatccttggcgagaaaacaaaa
tcgaataatacgatagaggtttttaaaacactcgggatagaagcagcgagaacaactatc
atgtcagaaattaaatcggtaatggaaaatcatggaatcaatattgatcgtcgacattta
atgctcttggcagatttgatgactagtagaggagaagttcttggtataacaagacaaggt
ttagcaaagatgaaagaatctgtcttaaatttagcatcgtttgaaaaaacggcggatcat
ctatttgatgcggcttattatggacaaaaagatattatatgcggcgtatcagaatcaatc
ataatgggtattccagttccattaggcacaggaattttcaagctacttcataaggcagat
aaagatgaaccatctaaaagggaacttctttttgacaatccacaataccataagccactt
cgttccggaagacgacttcaacgagtacgaccgcgtctaacattacaaatatcgccttaa
DBGET
integrated database retrieval system
