Pogonomyrmex barbatus (red harvester ant): 105423810
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Entry
105423810 CDS
T04903
Name
(RefSeq) WD repeat-containing protein 18
KO
K14829
pre-rRNA-processing protein IPI3
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbar03009
]
105423810
Ribosome biogenesis [BR:
pbar03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
105423810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
EIF3I
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_NWD2_C
Beta-prop_VPS8
Beta-prop_IFT140_1st
ANAPC4_WD40
WDR54
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR19_1st
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
105423810
NCBI-ProteinID:
XP_011632027
UniProt:
A0A6I9VV86
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MSRITDAKEVILTSDTTGENWSAAVWDPRNGSLLSVYKNATALGHRSLQLLSDGYVLGAS
ATRPFIHIWPLNNPSPLPHVRLTTPGKVSALTCTPNGSYIIVSASEKLFIWQTCNGRLMA
NLTKHYQTVNCLAVTKDGSLFASAGEDGLVLVWSLYSALNDNNCSPVHTFNNHNLPVKDL
YFSHGGARARLYTVSLDRTANVYELGSGDLLLSLVFNVPLTAIAVSIRESDLFVGCTTGE
IFQCNLHEPPRGIERHVTMGKNADEDSAIFRAHKSNVTALSVSMDCHRLLSGSTDNMVHI
WDIISRQVLKTLEHKGPITAAFFARGFENFRVPVLKPRLRVHNLQTISENDGGKGVVEVV
SRGRNATDILNFEYYVKNNSESDGLCEVPRELENTQREIMKLKKINAAMYQYHVTHLLND
IIDDE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaataaccgatgcaaaagaagtgatcctgaccagcgacaccaccggagagaat
tggagtgccgctgtatgggatcctcggaacggttctctgttgtccgtgtataaaaatgcg
acggcacttgggcatcgcagccttcagcttttgagcgacggttacgtgctaggcgcgagt
gctacgagaccctttatacacatctggccgttgaacaatccgtcacccttgcctcatgtt
cgactgaccacaccgggtaaagtgagcgctttaacttgtacaccgaatggctcgtacata
attgtttctgcgagcgaaaaactgtttatctggcagacatgcaatgggagattaatggcc
aatctgacaaaacattatcaaactgtcaattgcctagccgtcacaaaggacggttcactg
tttgccagtgctggcgaagatggcctggtattggtatggtcgctttatagtgcgttgaat
gataacaattgttctcccgttcacaccttcaacaatcacaatctaccagtcaaagattta
tattttagtcacggtggcgctcgtgcgagattatatacggtctcgttggatcgaaccgca
aacgtctacgagcttggtagcggagaccttctgctgtcattagtgttcaacgtaccgctt
acggcgatcgccgtcagtatccgcgagagcgatctttttgtgggctgtacgaccggtgag
atatttcaatgtaacctacacgagccgccacgtgggattgaaaggcacgtaactatgggg
aaaaacgcggacgaggacagcgccatattccgagcacacaaatcaaacgtgaccgctttg
tcggtatccatggattgccataggctgctgtccggctccaccgataatatggttcatatt
tgggacattattagccgacaagtgctgaaaacactcgagcacaagggaccgatcaccgca
gcgttctttgcgagaggatttgagaattttcgtgttcctgttctcaaaccacgcttacga
gtacataatctacagacgatatcggaaaacgatggcggaaagggcgttgttgaagtcgtt
tctagaggacgaaatgcgacagatattttgaactttgaatactacgtaaaaaataatagc
gaatctgatggattatgtgaggtaccgagagagttggagaatacgcaaagagagattatg
aaattaaaaaagatcaatgctgccatgtatcaataccatgttacacacttgttaaatgat
ataattgatgacgaataa
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