Pogonomyrmex barbatus (red harvester ant): 105424033
Help
Entry
105424033 CDS
T04903
Name
(RefSeq) spectrin beta chain
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar04517
IgSF CAM signaling
pbar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
105424033
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105424033
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pbar04812
]
105424033
Cytoskeleton proteins [BR:
pbar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
105424033
Intermediate filaments
Intermediate filament-binding proteins
105424033
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
CCDC162_middle
PH_11
Motif
Other DBs
NCBI-GeneID:
105424033
NCBI-ProteinID:
XP_011632368
UniProt:
A0A6I9VTM0
LinkDB
All DBs
Position
Unknown
AA seq
2399 aa
AA seq
DB search
MTTDISIVRGGWDPTLQQEIVDEYEYEGGNSSSRLFERSRIKALAGERELVQKKTFQKWV
NSHLVRCSCRIGDLYVDLRDGKMLIRLLEILSGERLPRPTKGKMRIHCLENVEKALQFLR
EQRVHLENMGSHDIVDGNPRLSLGLIWTIILRFQIQDITIEETDNQETKSAKDALLLWCQ
MKTAGYHNVNVRNFTTSWRDGLAFNAIIHKHRPDLIQFDKLSKSNAIYNLNNAFNVAEDK
LGLTKLLDAEDIFVDHPDEKSIITYVVTYYHYFSKMKQETVQGKRIGKVVGIAMENDRMI
HEYESLTSDLLRWIEATIEALGDRRFANSLVGVQSQLSQFSNYRTVEKPPKFVEKGNLEV
LLFTLQSKMRANNQKPYTPKEGKMISDINKAWERLEKAEHERELALREELIRQEKLEQLA
ARFNRKASMRETWLSENQRLVSQDNFGFDLAAVEAAAKKHEAIETDIFAYEERVQAVMAV
SQELEAENYHDIERINARKDNVLRLWNYLLELLRARRMRLELSLQLQQNFQEMLYILDSM
EEIKMRLLTDDYGKHLMGVEDLLQKHSLVEADINVLGERVKAVVQQSQRFLEHGEGYRPC
DPAIIVERVQQLENAYAELVRLAIERRTRLEESRKLWQFYWDMADEENWIKEKEQIVSTG
DIGHDLTTINLLLSKHKALENEIQSHEPQLMSVAAVGDELVRQQHFGSDRIQERLQEILA
MWNHLLDLAAFRRKRLVEAVDYHQLFADADDIDIWMLDTLRLVSSEDVGRDEANVQSLLK
KHKDVTDELKNYATTIDQLHQQASMLGEQDAKSPEVLERLTSIDNRYKELLELAKLRKQR
LLDALSLYKVFSETDGVEQWIGEKNRMLDTMVPAKDIEDVEIMKHRYNGFEKEMNANASR
VAVVNQLARQLLHVEHPNSEQIIARQNELNQKWAELREKAEGKREELNSAHGVQTFHIEC
RETVSWIEDKKRILQQTDSLEMDLTGVMTLQRRLSGMERDLAAIQAKLDALEKEAEVIQK
EHPEEAAVIRERIAQIHLIWEQLTQMLKERDAKLEEAGDLHRFLRDLDHFQAWLTKTQTD
VASEDTPTSLADAEKLLTQHQNIKEEIDNYTDDYQKMMEYGERLTTEAGDGDTQYMFLRE
RLNALKMGWEELHQMWVNRQNLLSNSLNLQVFDRDARQAEVLLSQQEHILAKDETPANFE
QAEHMIKRHEAFMTTMDANDEKINSVVQFAGRLVDEGHFAADKVKKKAENINERRRINRE
KANQLMEKLKDQLQLQMFVQDCEELGEWVQEKHITAQDETYRSAKTIHSKWTRHQAFEAE
IASNKDRLQQLQQAADELIQQKPDLAEIIKPKVAELVEQFADLETTTHDKGERLFDSNRE
VLIHQTCDDIDSWMNELEKQIESTDTGSDLASVNILMQKQQMIETQMAVKAKQVTELDKQ
AEHLQRTVPDDKMEEIKCKKEKVAQRFAQLKAPLIDRQRQLEKKKEAFQFRRDVEDEKLW
IAEKMPQATSTEYGNSLFNVHMLKKKNQSLRTEIENHEPRINLVCNNGQKLIDEGHEDSP
EFQKLISELTEKWRELKDAVDDRNKHLLQNEKAQQYFFDATEAESWMSEQELYMMVEDRG
KDEISAQNLMKKHESLEHAVEDYADTIRQLGETARQLINDQHPLADQIAVKQSQVDKLYA
GLKDLAGERRAKLDEALQLFMLNREVDDLEQWIQERELVAGSHELGQDYDHVTLLWERFK
EFARDTEAIGSERVEAVNGIADSLIATGHSDAATIAEWKDGLNEVWQDLLELIETRTQML
VASRELHKFFHDCKDVLGRILEKQNAMSDELGRDAGSVSALQRKHANFIQDLSTLQNQVT
QIEEESAKLQASYAGDKAREITNREAEVVAAWNNLQSLCEGRRAKLEDTGDLFRFFNMVR
TLMIWMDDVVRQMNTSEKPRDVAGVELLMNNHQSLKAEIDAREDNLMACINLGKDLLARN
HYASAQIKEKLAALTDHRNALLHRWEERWENLQLILEVYQFARDAAVAEAWLIAQEPYLM
SQELGHTIDEVENLIKKHEAFEKSAAAQEERFSALHRLTTFELKELKRREQEREEEERRK
KEEAAAAEAARLAKATPVTSPDEPPSERAETDGATSGERGEDEHAAHRKASTRTPQPQDK
PKEVHAQRPRQLSFREGDRTSSITPTSAKTPPYGIRTPTTPKGSGSEAARRKERSRSKSP
FRSFRWRKSAKSPSLDRSGVSDDEHSIPEQRSPSDDEFEGPLQRKHEWESTTKKASNRSW
DKVYMVVRGQNLYVYKDQKSYKASPDQPYKGEAPLDLRGATITVASDYTKKKHVFRVKSQ
SGSDFLFQAKDDTEMNDWVSALNQAAQGTSGASTSRAHTLPAPTQAETKRRSFFTLKKK
NT seq
7200 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgacatctcgatagtgcgtgggggttgggaccccacgctacaacaagagatt
gtcgacgagtacgaatacgaggggggaaattcgagttcgagacttttcgaacgatcacgt
atcaaggcactagctggtgagcgtgaattagtgcagaagaagactttccaaaaatgggtc
aattcccacttagtccgatgttcgtgccgaatcggcgatctatacgtcgatctgcgagac
ggaaaaatgctgataaggctgttggaaatcttgtcgggtgagcgtttaccacgtcctacc
aagggcaagatgcgtatccactgcctggagaatgtggagaaggcgctgcagttcctgcgc
gagcagagggtacacctggagaacatgggatctcacgatatcgtcgatgggaatccacgt
ttgagtctgggtctcatctggacaataattttgagatttcagattcaggatattaccatc
gaagagacggataatcaagagaccaaatccgccaaggacgcgttattgctgtggtgtcaa
atgaagaccgccggctatcacaacgtgaacgtgagaaattttacgacatcgtggcgggac
ggtctggcgttcaacgcgatcatacataagcaccgtccagatctgattcagttcgacaag
ctctccaagtcgaatgcgatttacaatctcaataatgctttcaatgtcgcggaggataaa
ctcggactcacgaaattactggacgccgaggacatctttgtcgatcatccggatgaaaaa
tctatcataacatatgtcgtcacgtattatcattatttctcgaagatgaaacaggaaacc
gtgcaaggtaagaggattggcaaagtggttggtatcgcgatggagaacgaccgtatgata
cacgagtacgaaagtcttaccagcgatctgctgcgctggatcgaggctacgatagaagcg
ctcggcgatcgcaggttcgcgaattctttggtaggcgttcaatcacaactctcacaattc
tcgaattatcgcacggtggaaaaacctcccaagtttgtggagaaaggtaatcttgaggta
ttgctattcactttacaatcgaagatgcgcgcgaacaatcagaagccctatacacctaaa
gaaggcaagatgatatccgatattaacaaggcttgggagagactagagaaagctgaacac
gagcgagaattggctctccgtgaggaattgattcggcaggagaagttggagcagttagct
gccagatttaataggaaggctagcatgcgcgagacatggttgtcagagaatcagcgattg
gtatcacaggataatttcggttttgatctcgctgccgtggaagccgccgcgaaaaagcat
gaagccatcgagactgacatctttgcttatgaagagcgcgtacaggctgtcatggcggtt
tcgcaggagctcgaagcggagaactatcatgacatcgagcgtattaatgctcgcaaggat
aatgtgctgcgattgtggaactatcttttggaattgctccgcgctaggcgaatgcggctg
gaactatcattgcaattacagcaaaacttccaagagatgttatacattttggacagcatg
gaggaaatcaagatgcgactgctaacagacgattatggcaaacatctgatgggcgtggag
gatctgttgcagaagcactctcttgtcgaagcagatatcaacgtgcttggcgaaagagtc
aaggccgttgtccaacagagccagagattcctagagcacggagaaggctatcgaccgtgt
gatccggccattattgtcgaacgcgtgcaacaactggagaacgcgtacgccgagttggtg
cggttagcgatcgagcgtcgtaccaggctcgaggaatctcgaaaactctggcagttttat
tgggacatggcggacgaagaaaattggataaaggaaaaggagcagattgtatccacaggt
gacatcggtcacgacttgaccactatcaatttattgctgtccaagcataaggcactagaa
aatgagatacaatcgcacgaaccgcaattgatgtcagtcgcagcggttggcgatgagtta
gttcggcaacaacactttggttccgatcgtattcaagagagacttcaggagatacttgcc
atgtggaatcatttgctggatctggcagctttcagaagaaagcgactcgtagaggctgtt
gactatcaccaactgtttgcagatgcggatgatatagacatttggatgttggacacttta
cgacttgtctcgtccgaagatgtcggcagagacgaggcaaacgtacaatcattgttgaag
aagcacaaagatgtaacggacgagcttaagaattatgctacgactatcgatcaacttcac
cagcaggcatctatgttaggcgaacaagacgctaaatcaccggaagttttggagagactt
acctctatagataacagatacaaagaacttcttgagctggccaaattacgtaagcagagg
ctgttggatgcgttatcgttgtataaggtgttcagcgagaccgacggagtcgagcaatgg
atcggtgagaaaaatagaatgctagatacgatggtacctgccaaggatatcgaagatgtc
gagatcatgaaacatcgctataatggcttcgagaaagagatgaacgcgaatgcatctcgc
gttgccgtggttaatcaattggccagacaattgctgcatgttgaacatcctaattcggaa
caaataatcgcgcgacaaaacgaactgaatcagaaatgggcagagttacgcgagaaggca
gagggcaaacgcgaggaactgaactctgcgcacggcgtgcagacattccacattgagtgt
cgcgaaaccgtatcctggatcgaagacaaaaagcgaattctgcagcagacagacagtttg
gagatggatttgacaggcgtgatgacactgcaacgtagactgagcggcatggagcgcgat
ttggctgccattcaagccaaactggacgctctggagaaagaggcagaagtcatacagaag
gaacatccagaggaagctgcggtgatacgcgagagaattgcacagattcatctgatttgg
gaacagctgacacagatgttaaaagaacgcgacgccaaactcgaggaggccggagatttg
catcggttcctacgcgatctcgatcacttccaggcatggctcacgaaaacgcaaaccgat
gtcgccagcgaagacacgccgactagtctcgctgacgccgagaaactactcacgcagcat
caaaacatcaaggaagagatcgataattatactgatgattatcagaagatgatggaatat
ggcgaacggttgacgacggaagctggcgatggcgatacgcaatacatgttcttgcgtgag
agattgaacgcgctaaagatgggctgggaggaattacatcagatgtgggtgaatcgtcag
aacttactatctaactctttgaatctacaggtgttcgatcgagacgcgcgtcaagcggag
gtgctcttgtcgcaacaggagcatattctcgctaaggatgagacgccagcgaacttcgag
caagcggaacacatgattaagagacatgaggccttcatgaccaccatggacgccaacgac
gaaaaaatcaactcggttgtgcaatttgctggacgtttggtcgatgagggacacttcgcg
gccgataaagtgaagaagaaggccgaaaacattaatgaacgtcggcgaattaatcgtgag
aaggctaatcaacttatggagaaactcaaagatcagctgcaattgcagatgtttgtacaa
gattgcgaagaactcggcgagtgggtacaagaaaaacatatcactgcccaagacgagacg
tatagaagtgcaaagactattcacagtaaatggactcgtcatcaggcgtttgaggcggag
atcgcgagcaacaaagatcgcctgcagcaattgcagcaagcagcagatgaattgattcaa
cagaaaccggatctggctgagatcatcaaaccgaaggtagctgaattggtagaacaattc
gccgatttggagaccacgactcatgataaaggtgagcgattgttcgattcgaaccgcgaa
gtgttgatacaccagacttgcgacgacatcgactcttggatgaatgaattggagaagcag
atagaaagtaccgacactggctccgatctggcgtccgtgaatatattgatgcaaaagcaa
cagatgattgaaacgcaaatggcagtgaaagcgaaacaggttaccgagctagacaaacag
gcagagcatttgcaacgtacagtacccgacgacaagatggaggaaattaagtgcaagaag
gagaaggtcgcccagagatttgctcagctcaaggcaccactcatcgatcgtcaacggcag
cttgaaaagaagaaggaggccttccaattccgtcgtgacgtcgaagacgagaaactatgg
attgcggagaaaatgcctcaggcaactagcactgaatatggaaactcgttgttcaacgtt
catatgttgaagaaaaagaatcaatcattacgcacagaaattgagaatcacgaacccagg
atcaatttagtgtgcaacaacgggcagaagttaattgacgaaggacatgaggacagccct
gagttccagaaattgatctctgaactgacggagaagtggcgcgagttgaaggacgccgtt
gatgatagaaacaaacatctgttgcaaaacgaaaaggcgcaacagtacttcttcgacgct
accgaggccgagtcatggatgagcgagcaggagctatacatgatggttgaggatcgcggt
aaagatgagatttctgctcagaatctgatgaagaaacacgagtcgcttgaacacgcggtt
gaggattatgcggatacgatccgtcagttaggcgagactgctaggcagctaataaatgac
cagcacccgttggccgatcaaattgccgtgaagcagtcgcaggtggacaaactctatgcc
ggcttgaaagatctggcgggcgagcgacgcgccaaactggacgaggcacttcagctgttt
atgcttaaccgagaagtcgacgatctcgaacaatggattcaggagagagaactggtcgcc
ggtagtcacgagttgggccaggattacgaccatgtgaccttgctgtgggagagattcaaa
gagttcgctcgcgacaccgaagcgatcggttccgagcgagtggaggccgtgaatggcatc
gctgattctctgatcgctaccggacattccgatgcggcgacgatcgctgaatggaaggac
ggtttgaacgaggtctggcaagacctgctcgaactgattgagacgcgcacacagatgctg
gtggccagccgcgagttgcacaaattcttccacgattgcaaggatgttctcggtagaatc
ttggagaaacaaaacgccatgtccgatgaattgggtcgcgacgccggctcggtgtccgcc
cttcaacgtaagcacgccaattttattcaggatttgtccacattgcaaaatcaagtgacg
cagatcgaggaggaatctgccaagctgcaggcgagctacgcgggcgacaaagcacgagag
attacaaatcgcgaggctgaagtcgtggcagcgtggaataatctgcaatcgttatgcgaa
ggcagacgagccaaattggaggacactggtgatctcttccgattcttcaatatggtcagg
actttgatgatctggatggacgatgttgtgcgccagatgaacacgtctgagaaaccgcgt
gatgttgccggcgttgaattgctgatgaataatcatcagagcttgaaggcggagatcgat
gccagggaagataatctaatggcgtgcattaatcttggaaaagacctattagctagaaat
cattatgccagcgcacagataaaagaaaaactggcggcattgaccgatcatagaaatgca
ttgttacaccgatgggaagaacgttgggagaatttgcaactcattttggaagtttatcaa
ttcgcccgagatgcggcagttgctgaagcatggttaattgctcaagagccgtatcttatg
agccaggaacttggtcatactatcgacgaagttgagaatttaatcaagaaacacgaggct
ttcgaaaaatcggcagctgcacaagaggaaaggtttagtgccttgcaccgacttactacc
ttcgagttgaaagaattaaagcgacgagagcaagaaagggaagaagaagaaagacgtaaa
aaggaggaagcggcagcggcggaagctgcacgtttggctaaagcgacacccgttactagt
ccagatgaaccacctagcgaaagagctgaaactgatggcgcaaccagcggagaacgcgga
gaggacgaacatgcggcacatcgcaaggcttctacacgtacaccacagcctcaagataag
cccaaggaagtgcatgcacaaagacctagacagctgtctttccgggaaggagataggact
tcatctatcacgccaacatctgcgaaaactccgccttatggtatccgcacgccgacaact
ccgaaaggcagtggctccgaggctgcaaggcgtaaggaacgaagccgcagcaagtcacca
ttcaggagcttccgctggagaaagtccgccaagtcgccgagtttagatcgcagtggcgtg
agtgatgatgagcacagtattcctgagcaacgaagtccgagcgacgacgagtttgaaggg
ccattacagcgaaagcacgagtgggaaagtacgacgaagaaggcgtccaatcgctcctgg
gacaaggtttacatggtcgtacgtggacagaatttatatgtatataaagatcagaagtcg
tacaaagcatcgcccgatcaaccatacaaaggagaagctccccttgacttacgaggcgca
actattaccgtagcgagtgattacactaagaagaaacatgtcttccgagtcaagtcgcaa
agcggatccgacttcctgttccaggccaaagacgatactgaaatgaacgattgggtgtcc
gcattaaatcaagcggcgcaaggaacatcaggtgcaagtacatctagggctcacactttg
ccagccccgacacaagccgaaactaagcggcgtagtttcttcactctcaagaaaaagtaa
DBGET
integrated database retrieval system
