Pogonomyrmex barbatus (red harvester ant): 105424034
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Entry
105424034 CDS
T04903
Name
(RefSeq) LOW QUALITY PROTEIN: vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
pbar
Pogonomyrmex barbatus (red harvester ant)
Pathway
pbar04140
Autophagy - animal
pbar04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pbar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105424034
04148 Efferocytosis
105424034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pbar04131
]
105424034
Membrane trafficking [BR:
pbar04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
105424034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
Beta-prop_RIG_2nd
Zn-C2H2_12
AP_endonuc_2
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
105424034
NCBI-ProteinID:
XP_011632369
UniProt:
A0A6I9VYT7
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MHDAYEETSILNITVQIESMAAYDDNLLIGTREGHLLMYNVPSIFDDSHKLELLRHSKNF
NKKRINQIDVVPEYNLLIILTDNIVCIHDLNSPNFQQICQLPKTRGATLFTLDIQSTQSL
TGEKNTVVRLCVAVKRKLQLYYWKGKKFEEFKDFEITVPDIPRQLSWCGETLILGFRGLS
YTIFDLNGKPKELFPTGKSPEPSITKLSDNSFVLGKDSQSVVMDTKGELVQHNPLKWSDT
PNAIAWDDPYLLGIVHDRLEVYTLEGCLHIQTIKDLNKARLIYRCKQGRVFVASISQIWC
VKAVDVTLQIRTLLEQNQFQLALKLTSLSAITDEEKAKQTYKIQTLYAHHLFYNKRFQEA
MDLFLKLGTDPYEVIRLFPDLVTPSTSTHELSESAPNLPKLQDHDLEKGLRALIVFLTEV
RHKLMAKDKELSKEKNGVNGXKNLTAVATEQLLKIIDTTLLKCYLQTTDALVAPLLRLNH
CHLAEAEKTLLMHQKYPELIILYQTKGQHKKALELLEKHAKENDSSLKGIERTIQYLQHL
GKDHMDLILKFAGWVLTEDPEQGLRIFMEDIQEVENLPRPKILDYLLCFHKDLVIQYLEH
VVHVWEDTNPLFHNVLIHQYKEKCLAAMNANASPAEKEILQHIRQKLQQFLEKSAYYTPE
TILVHFPFDSLFEERAIILGRLGRHQQAISIYVSLLNDIPRAIQYCQNVYTKYQSNDRTE
RQKQINNADEVYVLLIQQLLKPNNDGILMAGCNPEIQRTTQPDLEMALRLLEEHASKINP
MKVLEVLPDSVPIGRIKHFLEVSLQNNLNAKRRTQVLKGLLYAEHLQVQEQRMHYESQSV
LMTEFNICPVCKKRFGNQSAFARYPNGDIVHYSCQDRK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgcttacgaggaaacgtctatattaaatatcactgtgcagattgaatctatg
gctgcttatgatgacaacttattgataggtaccagggaaggtcatcttcttatgtacaat
gtcccatcgatattcgatgacagtcacaaattggaattattacgacacagcaagaacttt
aacaagaaacgaatcaatcagatagatgttgtgccagaatacaatttacttattatccta
acagataatattgtatgcattcatgatttaaattcaccaaattttcaacaaatatgtcaa
ttaccaaagactcgtggtgctactctgtttaccctggatattcagtcgactcagagcctg
acaggagaaaagaacacagtggtacgtttgtgtgtcgctgttaaacgtaaattgcaactg
tattattggaagggaaagaagttcgaggaatttaaagattttgaaataactgtgccagac
atacctcgtcaattatcatggtgtggcgaaacgttaatattaggatttcggggattatct
tatactatttttgatctaaatggcaaacctaaggaactcttccctactggaaaatctcca
gaacccagtattacaaaattatcagacaattctttcgtcctaggcaaagattctcagtcg
gtcgtcatggatacaaaaggagaattggttcaacataacccattaaagtggtcagataca
cctaatgcaatagcgtgggatgatccttatttacttggtatagtgcatgacagattggaa
gtgtataccttagaaggatgtcttcatattcagacaataaaagatctaaataaagctaga
cttatatatcgatgtaaacaagggagagtctttgtagcatccattagccagatttggtgt
gtcaaggcagttgacgttactttgcaaattagaactttattggagcaaaatcagtttcag
ttggcgcttaaattaaccagcttatcagctataacagatgaggagaaagccaaacaaacg
tataaaatacagacattgtacgcacatcatctgttttacaataagcgatttcaagaggct
atggatttgttcttaaaactgggaaccgatccatatgaagtgattagattgtttccagat
ttagttacgccttcgactagtactcatgaacttagtgaatcagcacctaatttgccaaag
ttgcaagatcacgacttagaaaagggtttacgtgcattgatagttttcttaactgaggtc
aggcataagttaatggcaaaagataaagaacttagcaaggagaaaaacggagtaaatgga
ngaaaaaatttaaccgcggttgctaccgaacagcttttaaaaattatagatactactctt
ttgaagtgctatctgcagaccactgatgctttggtggcgcctttacttagattaaatcac
tgtcacttggcagaagctgagaaaactttattgatgcatcagaaatatccagagctcatt
atattgtatcaaaccaaaggacaacacaaaaaagcattagagttattggagaagcatgcg
aaggaaaacgattctagtctaaaaggtattgagagaactatacagtatttgcaacatctt
ggtaaggatcacatggatttaatactgaagtttgctggatgggttttaactgaggatcct
gagcaaggccttagaatatttatggaagatatacaggaagttgaaaatttacctagacca
aagatattggattatctcctatgtttccataaagacttagtaatacagtatttggaacac
gtagtacacgtttgggaagataccaacccactgtttcataatgtcttgatacatcagtac
aaagaaaagtgtttagccgccatgaatgcaaatgcatcgccagcggagaaagagatcttg
caacatattcgacaaaaattgcaacagtttctagaaaaatcggcgtattatacgccggaa
acgatattagtgcattttccatttgacagtttatttgaagaacgcgcgattatactcgga
cgactcggtcgtcatcagcaagctatctcgatatatgttagtcttttaaatgatatacca
cgtgcaatacagtattgtcaaaatgtatatacaaaatatcaaagtaacgatcgtacggag
aggcaaaaacaaataaataatgccgacgaggtgtatgttttactgattcagcaattatta
aaacctaataatgatggaattttaatggctggttgtaatccggaaattcaaagaacaaca
cagccagatttagagatggcccttcgactgctagaggaacacgcttcaaagataaatcct
atgaaagttctggaggttctaccggattccgttcctattggtaggataaaacactttctg
gaagtcagtttacagaataacttgaatgcaaaacggagaacgcaggttctcaaagggttg
ctttacgcggaacatttacaagtgcaggaacaacggatgcattacgaatcacagagtgtc
ctcatgacagaatttaacatatgtccagtttgtaaaaagcgattcggtaaccaaagtgct
tttgcgagatatccgaatggcgatatagtgcattactcttgtcaagatcgcaagtga
DBGET
integrated database retrieval system
